Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.12■□□□□ 0.49
LCN1P31025 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LCN1P31025 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.12■□□□□ 0.49
LCN1P31025 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.12■□□□□ 0.49
LCN1P31025 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
LCN1P31025 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.12■□□□□ 0.49
LCN1P31025 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.12■□□□□ 0.49
LCN1P31025 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.12■□□□□ 0.49
LCN1P31025 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.12■□□□□ 0.49
LCN1P31025 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
LCN1P31025 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.12■□□□□ 0.49
LCN1P31025 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LCN1P31025 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LCN1P31025 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCN1P31025 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.11■□□□□ 0.49
LCN1P31025 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.11■□□□□ 0.49
LCN1P31025 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LCN1P31025 AC087289.5-201ENST00000586076 3175 ntBASIC18.11■□□□□ 0.49
LCN1P31025 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 KRT17P3-201ENST00000420566 1262 ntBASIC18.11■□□□□ 0.49
LCN1P31025 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.11■□□□□ 0.49
LCN1P31025 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
LCN1P31025 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.11■□□□□ 0.49
LCN1P31025 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
LCN1P31025 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.11■□□□□ 0.49
LCN1P31025 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 AC008403.3-201ENST00000598924 454 ntBASIC18.11■□□□□ 0.49
LCN1P31025 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LCN1P31025 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
LCN1P31025 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LCN1P31025 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
LCN1P31025 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LCN1P31025 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCN1P31025 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LCN1P31025 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LCN1P31025 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
LCN1P31025 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.1■□□□□ 0.49
LCN1P31025 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.1■□□□□ 0.49
LCN1P31025 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.1■□□□□ 0.49
LCN1P31025 YBX1P10-201ENST00000444752 975 ntBASIC18.1■□□□□ 0.49
LCN1P31025 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.1■□□□□ 0.49
LCN1P31025 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.1■□□□□ 0.49
LCN1P31025 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.1■□□□□ 0.49
LCN1P31025 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.1■□□□□ 0.49
LCN1P31025 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.1■□□□□ 0.49
LCN1P31025 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCN1P31025 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LCN1P31025 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.09■□□□□ 0.49
LCN1P31025 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LCN1P31025 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.09■□□□□ 0.49
LCN1P31025 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.09■□□□□ 0.49
LCN1P31025 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCN1P31025 PRKY-204ENST00000533551 1019 ntBASIC18.09■□□□□ 0.49
LCN1P31025 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms