Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.62■□□□□ 0.89
MMP8P22894 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MMP8P22894 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.62■□□□□ 0.89
MMP8P22894 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.62■□□□□ 0.89
MMP8P22894 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.62■□□□□ 0.89
MMP8P22894 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.62■□□□□ 0.89
MMP8P22894 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.62■□□□□ 0.89
MMP8P22894 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
MMP8P22894 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP8P22894 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.62■□□□□ 0.89
MMP8P22894 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
MMP8P22894 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
MMP8P22894 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
MMP8P22894 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
MMP8P22894 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.61■□□□□ 0.89
MMP8P22894 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
MMP8P22894 KRT18P16-201ENST00000510337 1294 ntBASIC20.61■□□□□ 0.89
MMP8P22894 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.61■□□□□ 0.89
MMP8P22894 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.61■□□□□ 0.89
MMP8P22894 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.61■□□□□ 0.89
MMP8P22894 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.61■□□□□ 0.89
MMP8P22894 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.61■□□□□ 0.89
MMP8P22894 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
MMP8P22894 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.61■□□□□ 0.89
MMP8P22894 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.61■□□□□ 0.89
MMP8P22894 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
MMP8P22894 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP8P22894 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.61■□□□□ 0.89
MMP8P22894 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
MMP8P22894 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MMP8P22894 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.6■□□□□ 0.89
MMP8P22894 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.6■□□□□ 0.89
MMP8P22894 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.6■□□□□ 0.89
MMP8P22894 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.6■□□□□ 0.89
MMP8P22894 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.6■□□□□ 0.89
MMP8P22894 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP8P22894 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MMP8P22894 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
MMP8P22894 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP8P22894 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.6■□□□□ 0.89
MMP8P22894 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.6■□□□□ 0.89
MMP8P22894 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP8P22894 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP8P22894 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP8P22894 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP8P22894 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP8P22894 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP8P22894 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
MMP8P22894 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP8P22894 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
MMP8P22894 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP8P22894 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.59■□□□□ 0.89
MMP8P22894 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP8P22894 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP8P22894 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.59■□□□□ 0.89
MMP8P22894 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.59■□□□□ 0.89
MMP8P22894 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
MMP8P22894 KRT8P8-201ENST00000434750 1448 ntBASIC20.59■□□□□ 0.89
MMP8P22894 AL032819.2-201ENST00000624543 2162 ntBASIC20.59■□□□□ 0.89
MMP8P22894 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.59■□□□□ 0.89
MMP8P22894 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP8P22894 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.59■□□□□ 0.89
MMP8P22894 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.59■□□□□ 0.89
MMP8P22894 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.58■□□□□ 0.89
MMP8P22894 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MMP8P22894 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.58■□□□□ 0.89
MMP8P22894 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MMP8P22894 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
MMP8P22894 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MMP8P22894 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms