Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DOBP13765 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DOBP13765 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DOBP13765 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DOBP13765 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DOBP13765 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOBP13765 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOBP13765 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOBP13765 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOBP13765 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOBP13765 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOBP13765 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DOBP13765 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOBP13765 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOBP13765 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOBP13765 AC093484.2-201ENST00000580996 2166 ntBASIC17.55■□□□□ 0.4
HLA-DOBP13765 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOBP13765 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOBP13765 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 KRT18P6-201ENST00000555540 1265 ntBASIC17.55■□□□□ 0.4
HLA-DOBP13765 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 AC008403.3-201ENST00000598924 454 ntBASIC17.55■□□□□ 0.4
HLA-DOBP13765 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOBP13765 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOBP13765 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DOBP13765 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DOBP13765 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DOBP13765 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DOBP13765 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DOBP13765 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DOBP13765 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
HLA-DOBP13765 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DOBP13765 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DOBP13765 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DOBP13765 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
HLA-DOBP13765 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DOBP13765 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.53■□□□□ 0.4
HLA-DOBP13765 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HLA-DOBP13765 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DOBP13765 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DOBP13765 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DOBP13765 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DOBP13765 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DOBP13765 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DOBP13765 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
HLA-DOBP13765 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DOBP13765 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.52■□□□□ 0.4
HLA-DOBP13765 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DOBP13765 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.52■□□□□ 0.4
HLA-DOBP13765 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms