Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL6A2P12110 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.35■□□□□ 0.69
COL6A2P12110 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL6A2P12110 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.35■□□□□ 0.69
COL6A2P12110 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.35■□□□□ 0.69
COL6A2P12110 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL6A2P12110 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL6A2P12110 TFP1-202ENST00000475455 1573 ntBASIC19.35■□□□□ 0.69
COL6A2P12110 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL6A2P12110 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.35■□□□□ 0.69
COL6A2P12110 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL6A2P12110 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL6A2P12110 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL6A2P12110 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL6A2P12110 LETM1P2-201ENST00000597330 2178 ntBASIC19.34■□□□□ 0.69
COL6A2P12110 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL6A2P12110 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL6A2P12110 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL6A2P12110 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.34■□□□□ 0.69
COL6A2P12110 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL6A2P12110 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL6A2P12110 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL6A2P12110 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL6A2P12110 AC073210.2-201ENST00000430369 194 ntBASIC19.34■□□□□ 0.69
COL6A2P12110 AL162430.1-201ENST00000480705 870 ntBASIC19.34■□□□□ 0.69
COL6A2P12110 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.34■□□□□ 0.69
COL6A2P12110 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL6A2P12110 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL6A2P12110 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL6A2P12110 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.34■□□□□ 0.69
COL6A2P12110 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL6A2P12110 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
COL6A2P12110 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
COL6A2P12110 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COL6A2P12110 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL6A2P12110 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.33■□□□□ 0.69
COL6A2P12110 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
COL6A2P12110 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL6A2P12110 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL6A2P12110 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL6A2P12110 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.33■□□□□ 0.69
COL6A2P12110 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL6A2P12110 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.33■□□□□ 0.69
COL6A2P12110 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.33■□□□□ 0.69
COL6A2P12110 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.33■□□□□ 0.69
COL6A2P12110 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL6A2P12110 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL6A2P12110 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
COL6A2P12110 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL6A2P12110 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL6A2P12110 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL6A2P12110 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL6A2P12110 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
COL6A2P12110 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL6A2P12110 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
COL6A2P12110 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL6A2P12110 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL6A2P12110 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.33■□□□□ 0.68
COL6A2P12110 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL6A2P12110 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
COL6A2P12110 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.32■□□□□ 0.68
COL6A2P12110 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.32■□□□□ 0.68
COL6A2P12110 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.32■□□□□ 0.68
COL6A2P12110 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 MIR5787-201ENST00000611784 55 ntBASIC19.32■□□□□ 0.68
COL6A2P12110 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.32■□□□□ 0.68
COL6A2P12110 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.32■□□□□ 0.68
COL6A2P12110 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.32■□□□□ 0.68
COL6A2P12110 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
COL6A2P12110 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 AC093503.3-201ENST00000624917 2352 ntBASIC19.32■□□□□ 0.68
COL6A2P12110 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL6A2P12110 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.32■□□□□ 0.68
COL6A2P12110 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.31■□□□□ 0.68
COL6A2P12110 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL6A2P12110 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL6A2P12110 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL6A2P12110 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL6A2P12110 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL6A2P12110 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL6A2P12110 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
COL6A2P12110 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
COL6A2P12110 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL6A2P12110 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL6A2P12110 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.31■□□□□ 0.68
COL6A2P12110 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
COL6A2P12110 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.31■□□□□ 0.68
COL6A2P12110 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.31■□□□□ 0.68
COL6A2P12110 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL6A2P12110 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms