Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HTR1AP08908 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HTR1AP08908 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HTR1AP08908 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.86■□□□□ 0.45
HTR1AP08908 AC010141.2-201ENST00000452426 721 ntBASIC17.86■□□□□ 0.45
HTR1AP08908 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.86■□□□□ 0.45
HTR1AP08908 MIR6084-201ENST00000622012 110 ntBASIC17.86■□□□□ 0.45
HTR1AP08908 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HTR1AP08908 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HTR1AP08908 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HTR1AP08908 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTR1AP08908 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HTR1AP08908 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HTR1AP08908 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HTR1AP08908 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.85■□□□□ 0.45
HTR1AP08908 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HTR1AP08908 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
HTR1AP08908 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.85■□□□□ 0.45
HTR1AP08908 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.85■□□□□ 0.45
HTR1AP08908 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HTR1AP08908 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.85■□□□□ 0.45
HTR1AP08908 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.85■□□□□ 0.45
HTR1AP08908 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
HTR1AP08908 AL031432.3-201ENST00000607698 485 ntBASIC17.85■□□□□ 0.45
HTR1AP08908 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HTR1AP08908 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.85■□□□□ 0.45
HTR1AP08908 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTR1AP08908 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.85■□□□□ 0.45
HTR1AP08908 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.84■□□□□ 0.45
HTR1AP08908 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.84■□□□□ 0.45
HTR1AP08908 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.84■□□□□ 0.45
HTR1AP08908 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.84■□□□□ 0.45
HTR1AP08908 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.84■□□□□ 0.45
HTR1AP08908 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTR1AP08908 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.83■□□□□ 0.45
HTR1AP08908 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.83■□□□□ 0.45
HTR1AP08908 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HTR1AP08908 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.83■□□□□ 0.45
HTR1AP08908 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
HTR1AP08908 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
HTR1AP08908 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.83■□□□□ 0.45
HTR1AP08908 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HTR1AP08908 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms