Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SRPRAP08240 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRPRAP08240 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRPRAP08240 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SRPRAP08240 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.82■□□□□ 0.76
SRPRAP08240 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SRPRAP08240 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SRPRAP08240 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.81■□□□□ 0.76
SRPRAP08240 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.81■□□□□ 0.76
SRPRAP08240 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.81■□□□□ 0.76
SRPRAP08240 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.81■□□□□ 0.76
SRPRAP08240 MIR6786-201ENST00000616843 113 ntBASIC19.81■□□□□ 0.76
SRPRAP08240 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.81■□□□□ 0.76
SRPRAP08240 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.81■□□□□ 0.76
SRPRAP08240 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.81■□□□□ 0.76
SRPRAP08240 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SRPRAP08240 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.81■□□□□ 0.76
SRPRAP08240 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.8■□□□□ 0.76
SRPRAP08240 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRPRAP08240 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SRPRAP08240 MESTP1-201ENST00000404287 994 ntBASIC19.8■□□□□ 0.76
SRPRAP08240 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.8■□□□□ 0.76
SRPRAP08240 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRPRAP08240 B3GAT3P1-201ENST00000471720 806 ntBASIC19.8■□□□□ 0.76
SRPRAP08240 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SRPRAP08240 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRPRAP08240 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.8■□□□□ 0.76
SRPRAP08240 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.8■□□□□ 0.76
SRPRAP08240 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.8■□□□□ 0.76
SRPRAP08240 AP000525.1-201ENST00000608286 694 ntBASIC19.8■□□□□ 0.76
SRPRAP08240 DGCR10-201ENST00000609839 495 ntBASIC19.8■□□□□ 0.76
SRPRAP08240 AC097493.4-201ENST00000641197 219 ntBASIC19.8■□□□□ 0.76
SRPRAP08240 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRPRAP08240 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRPRAP08240 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SRPRAP08240 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SRPRAP08240 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SRPRAP08240 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRPRAP08240 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.79■□□□□ 0.76
SRPRAP08240 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRPRAP08240 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.79■□□□□ 0.76
SRPRAP08240 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRPRAP08240 FITM1-202ENST00000559294 800 ntBASIC19.79■□□□□ 0.76
SRPRAP08240 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.79■□□□□ 0.76
SRPRAP08240 AC012306.2-201ENST00000609350 630 ntBASIC19.79■□□□□ 0.76
SRPRAP08240 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
SRPRAP08240 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRPRAP08240 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SRPRAP08240 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.78■□□□□ 0.76
SRPRAP08240 LINC01521-201ENST00000504184 1943 ntBASIC19.78■□□□□ 0.76
SRPRAP08240 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRPRAP08240 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SRPRAP08240 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRPRAP08240 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRPRAP08240 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRPRAP08240 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRPRAP08240 MIR1238-201ENST00000408483 83 ntBASIC19.78■□□□□ 0.76
SRPRAP08240 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.78■□□□□ 0.76
SRPRAP08240 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SRPRAP08240 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
SRPRAP08240 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.78■□□□□ 0.76
SRPRAP08240 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SRPRAP08240 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.78■□□□□ 0.76
SRPRAP08240 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.78■□□□□ 0.76
SRPRAP08240 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRPRAP08240 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.78■□□□□ 0.76
SRPRAP08240 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.78■□□□□ 0.76
SRPRAP08240 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.78■□□□□ 0.76
SRPRAP08240 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRPRAP08240 AC099778.1-201ENST00000568593 1911 ntBASIC19.78■□□□□ 0.76
SRPRAP08240 AC092667.1-201ENST00000434301 2586 ntBASIC19.78■□□□□ 0.76
SRPRAP08240 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SRPRAP08240 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SRPRAP08240 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRPRAP08240 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.77■□□□□ 0.76
SRPRAP08240 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRPRAP08240 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRPRAP08240 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRPRAP08240 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.77■□□□□ 0.76
SRPRAP08240 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SRPRAP08240 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SRPRAP08240 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SRPRAP08240 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.77■□□□□ 0.76
SRPRAP08240 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SRPRAP08240 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRPRAP08240 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRPRAP08240 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.77■□□□□ 0.76
SRPRAP08240 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRPRAP08240 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms