Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
GGPS1O95749 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GGPS1O95749 CYP2D8P-201ENST00000433633 1490 ntBASIC22.03■■□□□ 1.12
GGPS1O95749 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
GGPS1O95749 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.02■■□□□ 1.12
GGPS1O95749 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
GGPS1O95749 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
GGPS1O95749 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.02■■□□□ 1.12
GGPS1O95749 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
GGPS1O95749 B3GAT3P1-201ENST00000471720 806 ntBASIC22.02■■□□□ 1.12
GGPS1O95749 AC011506.1-201ENST00000474329 610 ntBASIC22.02■■□□□ 1.12
GGPS1O95749 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.12
GGPS1O95749 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.02■■□□□ 1.12
GGPS1O95749 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.02■■□□□ 1.12
GGPS1O95749 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.02■■□□□ 1.12
GGPS1O95749 AC131212.4-201ENST00000623606 975 ntBASIC22.02■■□□□ 1.12
GGPS1O95749 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
GGPS1O95749 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
GGPS1O95749 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
GGPS1O95749 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.02■■□□□ 1.12
GGPS1O95749 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
GGPS1O95749 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
GGPS1O95749 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
GGPS1O95749 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.02■■□□□ 1.12
GGPS1O95749 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GGPS1O95749 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
GGPS1O95749 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GGPS1O95749 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
GGPS1O95749 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GGPS1O95749 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
GGPS1O95749 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GGPS1O95749 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GGPS1O95749 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GGPS1O95749 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.01■■□□□ 1.11
GGPS1O95749 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.01■■□□□ 1.11
GGPS1O95749 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
GGPS1O95749 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.01■■□□□ 1.11
GGPS1O95749 NAPSB-206ENST00000562112 1266 ntBASIC22.01■■□□□ 1.11
GGPS1O95749 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.01■■□□□ 1.11
GGPS1O95749 AC010331.1-201ENST00000611423 582 ntBASIC22.01■■□□□ 1.11
GGPS1O95749 HLA-A-209ENST00000638375 975 ntBASIC22.01■■□□□ 1.11
GGPS1O95749 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
GGPS1O95749 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.01■■□□□ 1.11
GGPS1O95749 AP005212.1-201ENST00000581547 1997 ntBASIC22.01■■□□□ 1.11
GGPS1O95749 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.01■■□□□ 1.11
GGPS1O95749 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GGPS1O95749 AL512408.1-201ENST00000569378 2000 ntBASIC22.01■■□□□ 1.11
GGPS1O95749 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GGPS1O95749 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
GGPS1O95749 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
GGPS1O95749 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GGPS1O95749 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GGPS1O95749 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22■■□□□ 1.11
GGPS1O95749 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GGPS1O95749 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GGPS1O95749 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GGPS1O95749 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
GGPS1O95749 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22■■□□□ 1.11
GGPS1O95749 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22■■□□□ 1.11
GGPS1O95749 AC010947.1-201ENST00000623454 693 ntBASIC22■■□□□ 1.11
GGPS1O95749 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
GGPS1O95749 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GGPS1O95749 LINC01568-207ENST00000641790 1380 ntBASIC21.99■■□□□ 1.11
GGPS1O95749 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GGPS1O95749 FEM1AP1-201ENST00000431297 1995 ntBASIC21.99■■□□□ 1.11
GGPS1O95749 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.99■■□□□ 1.11
GGPS1O95749 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GGPS1O95749 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
GGPS1O95749 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
GGPS1O95749 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.99■■□□□ 1.11
GGPS1O95749 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.99■■□□□ 1.11
GGPS1O95749 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.99■■□□□ 1.11
GGPS1O95749 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
GGPS1O95749 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.99■■□□□ 1.11
GGPS1O95749 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.99■■□□□ 1.11
GGPS1O95749 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GGPS1O95749 AP001271.2-201ENST00000624018 1556 ntBASIC21.99■■□□□ 1.11
GGPS1O95749 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
GGPS1O95749 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
GGPS1O95749 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
GGPS1O95749 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GGPS1O95749 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.98■■□□□ 1.11
GGPS1O95749 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
GGPS1O95749 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GGPS1O95749 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
GGPS1O95749 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.98■■□□□ 1.11
GGPS1O95749 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
GGPS1O95749 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.98■■□□□ 1.11
GGPS1O95749 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.98■■□□□ 1.11
GGPS1O95749 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.98■■□□□ 1.11
GGPS1O95749 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GGPS1O95749 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
GGPS1O95749 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
GGPS1O95749 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.98■■□□□ 1.11
GGPS1O95749 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.98■■□□□ 1.11
GGPS1O95749 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
GGPS1O95749 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GGPS1O95749 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GGPS1O95749 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.97■■□□□ 1.11
GGPS1O95749 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms