Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX4O95219 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX4O95219 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.37■□□□□ 0.53
SNX4O95219 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX4O95219 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX4O95219 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX4O95219 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
SNX4O95219 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX4O95219 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX4O95219 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX4O95219 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SNX4O95219 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX4O95219 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX4O95219 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX4O95219 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX4O95219 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SNX4O95219 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX4O95219 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
SNX4O95219 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX4O95219 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX4O95219 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SNX4O95219 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SNX4O95219 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX4O95219 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.36■□□□□ 0.53
SNX4O95219 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 KRT17P3-201ENST00000420566 1262 ntBASIC18.36■□□□□ 0.53
SNX4O95219 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX4O95219 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SNX4O95219 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX4O95219 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX4O95219 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SNX4O95219 AC008403.3-201ENST00000598924 454 ntBASIC18.36■□□□□ 0.53
SNX4O95219 AC092720.2-201ENST00000602388 1665 ntBASIC18.36■□□□□ 0.53
SNX4O95219 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SNX4O95219 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SNX4O95219 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SNX4O95219 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNX4O95219 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX4O95219 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.35■□□□□ 0.53
SNX4O95219 AC008687.6-201ENST00000596318 630 ntBASIC18.35■□□□□ 0.53
SNX4O95219 AC006058.3-201ENST00000606217 1069 ntBASIC18.35■□□□□ 0.53
SNX4O95219 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.35■□□□□ 0.53
SNX4O95219 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX4O95219 AP000974.1-201ENST00000623909 2387 ntBASIC18.35■□□□□ 0.53
SNX4O95219 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX4O95219 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNX4O95219 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX4O95219 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX4O95219 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX4O95219 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
SNX4O95219 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX4O95219 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX4O95219 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX4O95219 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX4O95219 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SNX4O95219 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX4O95219 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX4O95219 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX4O95219 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SNX4O95219 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.34■□□□□ 0.53
SNX4O95219 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX4O95219 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX4O95219 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.34■□□□□ 0.53
SNX4O95219 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX4O95219 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX4O95219 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX4O95219 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX4O95219 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX4O95219 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
SNX4O95219 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX4O95219 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX4O95219 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms