Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A2O43868 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A2O43868 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A2O43868 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC28A2O43868 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 MTDHP1-201ENST00000605323 784 ntBASIC18.85■□□□□ 0.61
SLC28A2O43868 AC110285.5-201ENST00000611501 352 ntBASIC18.85■□□□□ 0.61
SLC28A2O43868 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC28A2O43868 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC28A2O43868 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A2O43868 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A2O43868 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A2O43868 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A2O43868 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SLC28A2O43868 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A2O43868 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SLC28A2O43868 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A2O43868 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A2O43868 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
SLC28A2O43868 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A2O43868 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC28A2O43868 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SLC28A2O43868 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC28A2O43868 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A2O43868 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A2O43868 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A2O43868 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SLC28A2O43868 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A2O43868 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC28A2O43868 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC28A2O43868 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC28A2O43868 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC28A2O43868 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC28A2O43868 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC28A2O43868 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC28A2O43868 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC28A2O43868 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC28A2O43868 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC28A2O43868 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC28A2O43868 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC28A2O43868 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC28A2O43868 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC28A2O43868 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SLC28A2O43868 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SLC28A2O43868 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC28A2O43868 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A2O43868 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLC28A2O43868 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A2O43868 MCRIP2P1-201ENST00000394346 511 ntBASIC18.83■□□□□ 0.6
SLC28A2O43868 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC28A2O43868 PGM5P4-201ENST00000421970 445 ntBASIC18.83■□□□□ 0.6
SLC28A2O43868 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.83■□□□□ 0.6
SLC28A2O43868 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A2O43868 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC28A2O43868 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC28A2O43868 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC28A2O43868 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A2O43868 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A2O43868 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
SLC28A2O43868 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A2O43868 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A2O43868 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A2O43868 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC28A2O43868 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A2O43868 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A2O43868 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A2O43868 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SLC28A2O43868 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A2O43868 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC28A2O43868 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC28A2O43868 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC28A2O43868 KRASP1-201ENST00000407852 552 ntBASIC18.82■□□□□ 0.6
SLC28A2O43868 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC28A2O43868 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC28A2O43868 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SLC28A2O43868 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A2O43868 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC28A2O43868 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A2O43868 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC28A2O43868 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A2O43868 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A2O43868 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC28A2O43868 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A2O43868 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A2O43868 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A2O43868 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC28A2O43868 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A2O43868 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A2O43868 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A2O43868 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A2O43868 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A2O43868 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC28A2O43868 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC28A2O43868 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A2O43868 AC026471.5-201ENST00000615068 467 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms