Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC026471.5-201ENST00000615068 467 ntBASIC19.84■□□□□ 0.77
SMAD6O43541 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.84■□□□□ 0.77
SMAD6O43541 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.84■□□□□ 0.77
SMAD6O43541 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.84■□□□□ 0.77
SMAD6O43541 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.84■□□□□ 0.77
SMAD6O43541 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMAD6O43541 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.83■□□□□ 0.77
SMAD6O43541 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
SMAD6O43541 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMAD6O43541 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMAD6O43541 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMAD6O43541 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SMAD6O43541 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.83■□□□□ 0.77
SMAD6O43541 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMAD6O43541 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMAD6O43541 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMAD6O43541 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SMAD6O43541 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMAD6O43541 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.83■□□□□ 0.77
SMAD6O43541 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SMAD6O43541 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.83■□□□□ 0.77
SMAD6O43541 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMAD6O43541 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.83■□□□□ 0.77
SMAD6O43541 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMAD6O43541 MIR4785-201ENST00000585005 73 ntBASIC19.83■□□□□ 0.77
SMAD6O43541 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.83■□□□□ 0.76
SMAD6O43541 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMAD6O43541 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMAD6O43541 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.83■□□□□ 0.76
SMAD6O43541 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.82■□□□□ 0.76
SMAD6O43541 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD6O43541 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.82■□□□□ 0.76
SMAD6O43541 KRT17P2-201ENST00000300992 1314 ntBASIC19.82■□□□□ 0.76
SMAD6O43541 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD6O43541 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD6O43541 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD6O43541 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SMAD6O43541 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.82■□□□□ 0.76
SMAD6O43541 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.82■□□□□ 0.76
SMAD6O43541 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.82■□□□□ 0.76
SMAD6O43541 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.82■□□□□ 0.76
SMAD6O43541 AL355075.4-201ENST00000554988 638 ntBASIC19.82■□□□□ 0.76
SMAD6O43541 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.82■□□□□ 0.76
SMAD6O43541 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD6O43541 KRT8P8-201ENST00000434750 1448 ntBASIC19.82■□□□□ 0.76
SMAD6O43541 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD6O43541 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.82■□□□□ 0.76
SMAD6O43541 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SMAD6O43541 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMAD6O43541 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
SMAD6O43541 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SMAD6O43541 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SMAD6O43541 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SMAD6O43541 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SMAD6O43541 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SMAD6O43541 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.81■□□□□ 0.76
SMAD6O43541 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.81■□□□□ 0.76
SMAD6O43541 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 AP003071.4-201ENST00000562276 1284 ntBASIC19.81■□□□□ 0.76
SMAD6O43541 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.81■□□□□ 0.76
SMAD6O43541 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.81■□□□□ 0.76
SMAD6O43541 HLA-A-209ENST00000638375 975 ntBASIC19.81■□□□□ 0.76
SMAD6O43541 KRT16P1-201ENST00000399124 1418 ntBASIC19.81■□□□□ 0.76
SMAD6O43541 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SMAD6O43541 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.81■□□□□ 0.76
SMAD6O43541 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
SMAD6O43541 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.81■□□□□ 0.76
SMAD6O43541 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SMAD6O43541 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.81■□□□□ 0.76
SMAD6O43541 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMAD6O43541 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMAD6O43541 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SMAD6O43541 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMAD6O43541 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMAD6O43541 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMAD6O43541 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMAD6O43541 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SMAD6O43541 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.8■□□□□ 0.76
SMAD6O43541 AL355355.2-201ENST00000442321 338 ntBASIC19.8■□□□□ 0.76
SMAD6O43541 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms