Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHDO14521 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
SDHDO14521 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHDO14521 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.92■□□□□ 0.62
SDHDO14521 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.92■□□□□ 0.62
SDHDO14521 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.92■□□□□ 0.62
SDHDO14521 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.92■□□□□ 0.62
SDHDO14521 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHDO14521 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHDO14521 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHDO14521 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.92■□□□□ 0.62
SDHDO14521 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHDO14521 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHDO14521 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHDO14521 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
SDHDO14521 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SDHDO14521 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SDHDO14521 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SDHDO14521 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.91■□□□□ 0.62
SDHDO14521 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.91■□□□□ 0.62
SDHDO14521 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.91■□□□□ 0.62
SDHDO14521 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.91■□□□□ 0.62
SDHDO14521 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SDHDO14521 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SDHDO14521 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SDHDO14521 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.91■□□□□ 0.62
SDHDO14521 AC011767.1-201ENST00000617410 1153 ntBASIC18.91■□□□□ 0.62
SDHDO14521 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.91■□□□□ 0.62
SDHDO14521 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
SDHDO14521 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SDHDO14521 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 AC006333.2-201ENST00000607957 2099 ntBASIC18.91■□□□□ 0.62
SDHDO14521 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SDHDO14521 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SDHDO14521 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
SDHDO14521 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SDHDO14521 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SDHDO14521 AC141586.3-201ENST00000562166 1838 ntBASIC18.9■□□□□ 0.62
SDHDO14521 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.9■□□□□ 0.62
SDHDO14521 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
SDHDO14521 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
SDHDO14521 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.9■□□□□ 0.62
SDHDO14521 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
SDHDO14521 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 AL589743.5-201ENST00000616611 1050 ntBASIC18.9■□□□□ 0.62
SDHDO14521 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.9■□□□□ 0.62
SDHDO14521 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SDHDO14521 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.9■□□□□ 0.62
SDHDO14521 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
SDHDO14521 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SDHDO14521 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.9■□□□□ 0.62
SDHDO14521 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SDHDO14521 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SDHDO14521 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SDHDO14521 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SDHDO14521 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SDHDO14521 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SDHDO14521 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SDHDO14521 AC116351.2-201ENST00000606540 1585 ntBASIC18.89■□□□□ 0.62
SDHDO14521 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.89■□□□□ 0.62
SDHDO14521 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SDHDO14521 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SDHDO14521 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.89■□□□□ 0.61
SDHDO14521 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SDHDO14521 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SDHDO14521 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.89■□□□□ 0.61
SDHDO14521 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.89■□□□□ 0.61
SDHDO14521 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.89■□□□□ 0.61
SDHDO14521 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms