Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CDC7O00311 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC7O00311 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.22■□□□□ 0.67
CDC7O00311 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDC7O00311 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC7O00311 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC7O00311 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC7O00311 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDC7O00311 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDC7O00311 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDC7O00311 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.21■□□□□ 0.67
CDC7O00311 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDC7O00311 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC7O00311 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.21■□□□□ 0.67
CDC7O00311 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.21■□□□□ 0.67
CDC7O00311 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC7O00311 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.21■□□□□ 0.67
CDC7O00311 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 AL032819.2-201ENST00000624543 2162 ntBASIC19.21■□□□□ 0.67
CDC7O00311 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDC7O00311 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.21■□□□□ 0.67
CDC7O00311 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDC7O00311 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDC7O00311 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC7O00311 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDC7O00311 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDC7O00311 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDC7O00311 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDC7O00311 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.2■□□□□ 0.66
CDC7O00311 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDC7O00311 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 HLA-L-209ENST00000420110 1011 ntBASIC19.2■□□□□ 0.66
CDC7O00311 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.2■□□□□ 0.66
CDC7O00311 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.2■□□□□ 0.66
CDC7O00311 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.2■□□□□ 0.66
CDC7O00311 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 SOX15-203ENST00000570788 1093 ntBASIC19.2■□□□□ 0.66
CDC7O00311 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.2■□□□□ 0.66
CDC7O00311 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.2■□□□□ 0.66
CDC7O00311 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC7O00311 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDC7O00311 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC7O00311 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC7O00311 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CDC7O00311 AL355802.2-201ENST00000402069 882 ntBASIC19.19■□□□□ 0.66
CDC7O00311 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.19■□□□□ 0.66
CDC7O00311 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.19■□□□□ 0.66
CDC7O00311 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.19■□□□□ 0.66
CDC7O00311 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CDC7O00311 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.19■□□□□ 0.66
CDC7O00311 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC7O00311 AC098818.2-201ENST00000564925 2320 ntBASIC19.19■□□□□ 0.66
CDC7O00311 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC7O00311 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC7O00311 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC7O00311 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.19■□□□□ 0.66
CDC7O00311 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC7O00311 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC7O00311 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC7O00311 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC7O00311 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.19■□□□□ 0.66
CDC7O00311 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDC7O00311 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
CDC7O00311 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC7O00311 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC7O00311 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC7O00311 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC7O00311 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms