Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EIF3FO00303 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.18■□□□□ 0.66
EIF3FO00303 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.17■□□□□ 0.66
EIF3FO00303 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
EIF3FO00303 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.17■□□□□ 0.66
EIF3FO00303 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
EIF3FO00303 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.17■□□□□ 0.66
EIF3FO00303 KRT17P3-201ENST00000420566 1262 ntBASIC19.17■□□□□ 0.66
EIF3FO00303 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
EIF3FO00303 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.17■□□□□ 0.66
EIF3FO00303 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.17■□□□□ 0.66
EIF3FO00303 KRT18P16-201ENST00000510337 1294 ntBASIC19.17■□□□□ 0.66
EIF3FO00303 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 PRKY-204ENST00000533551 1019 ntBASIC19.17■□□□□ 0.66
EIF3FO00303 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.17■□□□□ 0.66
EIF3FO00303 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.17■□□□□ 0.66
EIF3FO00303 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.17■□□□□ 0.66
EIF3FO00303 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.17■□□□□ 0.66
EIF3FO00303 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.17■□□□□ 0.66
EIF3FO00303 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EIF3FO00303 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
EIF3FO00303 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.16■□□□□ 0.66
EIF3FO00303 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.16■□□□□ 0.66
EIF3FO00303 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
EIF3FO00303 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.16■□□□□ 0.66
EIF3FO00303 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.16■□□□□ 0.66
EIF3FO00303 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.16■□□□□ 0.66
EIF3FO00303 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.16■□□□□ 0.66
EIF3FO00303 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
EIF3FO00303 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
EIF3FO00303 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EIF3FO00303 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.16■□□□□ 0.66
EIF3FO00303 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.16■□□□□ 0.66
EIF3FO00303 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
EIF3FO00303 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
EIF3FO00303 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EIF3FO00303 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EIF3FO00303 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.15■□□□□ 0.66
EIF3FO00303 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EIF3FO00303 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
EIF3FO00303 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EIF3FO00303 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
EIF3FO00303 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EIF3FO00303 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.15■□□□□ 0.66
EIF3FO00303 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.15■□□□□ 0.66
EIF3FO00303 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.15■□□□□ 0.66
EIF3FO00303 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.15■□□□□ 0.66
EIF3FO00303 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.15■□□□□ 0.66
EIF3FO00303 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EIF3FO00303 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EIF3FO00303 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EIF3FO00303 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EIF3FO00303 KRT8P8-201ENST00000434750 1448 ntBASIC19.15■□□□□ 0.66
EIF3FO00303 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EIF3FO00303 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
EIF3FO00303 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.15■□□□□ 0.66
EIF3FO00303 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
EIF3FO00303 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
EIF3FO00303 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EIF3FO00303 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.14■□□□□ 0.65
EIF3FO00303 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EIF3FO00303 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EIF3FO00303 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
EIF3FO00303 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EIF3FO00303 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EIF3FO00303 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
EIF3FO00303 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.14■□□□□ 0.65
EIF3FO00303 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.14■□□□□ 0.65
EIF3FO00303 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EIF3FO00303 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
EIF3FO00303 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.14■□□□□ 0.65
EIF3FO00303 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.14■□□□□ 0.65
EIF3FO00303 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.14■□□□□ 0.65
EIF3FO00303 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms