Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 LINC01465-201ENST00000408887 1940 ntBASIC20.26■□□□□ 0.83
SRRM3A6NNA2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRRM3A6NNA2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.25■□□□□ 0.83
SRRM3A6NNA2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 BX088651.1-201ENST00000540551 451 ntBASIC20.25■□□□□ 0.83
SRRM3A6NNA2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRRM3A6NNA2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 AC009237.3-201ENST00000393279 1427 ntBASIC20.24■□□□□ 0.83
SRRM3A6NNA2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.24■□□□□ 0.83
SRRM3A6NNA2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 AC007322.4-201ENST00000509611 723 ntBASIC20.23■□□□□ 0.83
SRRM3A6NNA2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 AL691432.2-201ENST00000607222 2038 ntBASIC20.23■□□□□ 0.83
SRRM3A6NNA2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SRRM3A6NNA2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms