Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 AC125437.2-201ENST00000625180 2167 ntBASIC15.49■□□□□ 0.07
LINC01548A6NM66 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 AC008550.1-201ENST00000511500 884 ntBASIC15.48■□□□□ 0.07
LINC01548A6NM66 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 AC004264.1-201ENST00000608354 794 ntBASIC15.48■□□□□ 0.07
LINC01548A6NM66 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 AP006294.2-201ENST00000641667 209 ntBASIC15.48■□□□□ 0.07
LINC01548A6NM66 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01548A6NM66 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.48■□□□□ 0.07
LINC01548A6NM66 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 YBX1P10-201ENST00000444752 975 ntBASIC15.47■□□□□ 0.07
LINC01548A6NM66 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.47■□□□□ 0.07
LINC01548A6NM66 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01548A6NM66 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.46■□□□□ 0.07
LINC01548A6NM66 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 HTR7P1-201ENST00000538670 1336 ntBASIC15.46■□□□□ 0.07
LINC01548A6NM66 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
LINC01548A6NM66 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LINC01548A6NM66 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
LINC01548A6NM66 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.46■□□□□ 0.07
LINC01548A6NM66 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.46■□□□□ 0.07
LINC01548A6NM66 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 RPS2P4-201ENST00000476944 856 ntBASIC15.46■□□□□ 0.07
LINC01548A6NM66 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.46■□□□□ 0.07
LINC01548A6NM66 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.46■□□□□ 0.07
LINC01548A6NM66 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.46■□□□□ 0.07
LINC01548A6NM66 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.46■□□□□ 0.07
LINC01548A6NM66 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LINC01548A6NM66 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01548A6NM66 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.46■□□□□ 0.06
LINC01548A6NM66 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
LINC01548A6NM66 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.46■□□□□ 0.06
LINC01548A6NM66 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms