Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.26■□□□□ 0.03
FAM223BA6NKX1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 POU5F1P3-201ENST00000428824 1078 ntBASIC15.26■□□□□ 0.03
FAM223BA6NKX1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 FAM201B-201ENST00000458407 597 ntBASIC15.26■□□□□ 0.03
FAM223BA6NKX1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.26■□□□□ 0.03
FAM223BA6NKX1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 MTDHP1-201ENST00000605323 784 ntBASIC15.25■□□□□ 0.03
FAM223BA6NKX1 AC006058.3-201ENST00000606217 1069 ntBASIC15.25■□□□□ 0.03
FAM223BA6NKX1 AC004264.1-201ENST00000608354 794 ntBASIC15.25■□□□□ 0.03
FAM223BA6NKX1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FAM223BA6NKX1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 AC239809.2-201ENST00000415381 517 ntBASIC15.24■□□□□ 0.03
FAM223BA6NKX1 TUBB8P6-201ENST00000436895 1288 ntBASIC15.24■□□□□ 0.03
FAM223BA6NKX1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM223BA6NKX1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 NBPF21P-201ENST00000425093 1451 ntBASIC15.23■□□□□ 0.03
FAM223BA6NKX1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM223BA6NKX1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms