Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 PNMA6B-201ENST00000538162 1200 ntBASIC19.81■□□□□ 0.76
CCDC78A2IDD5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC78A2IDD5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 RPS2P52-201ENST00000469610 820 ntBASIC19.8■□□□□ 0.76
CCDC78A2IDD5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.8■□□□□ 0.76
CCDC78A2IDD5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC78A2IDD5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 SOX15-203ENST00000570788 1093 ntBASIC19.79■□□□□ 0.76
CCDC78A2IDD5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 HLA-B-256ENST00000639848 1089 ntBASIC19.79■□□□□ 0.76
CCDC78A2IDD5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC78A2IDD5 AC116351.2-201ENST00000606540 1585 ntBASIC19.78■□□□□ 0.76
CCDC78A2IDD5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 AC060766.5-201ENST00000590539 871 ntBASIC19.78■□□□□ 0.76
CCDC78A2IDD5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms