Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 Z99916.2-201ENST00000604037 246 ntBASIC16.1■□□□□ 0.17
A0A1W2PRF3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
A0A1W2PRF3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
A0A1W2PRF3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
A0A1W2PRF3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.09■□□□□ 0.17
A0A1W2PRF3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.09■□□□□ 0.17
A0A1W2PRF3 PHGDH-210ENST00000641115 1638 ntBASIC16.09■□□□□ 0.17
A0A1W2PRF3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 AC073130.3-201ENST00000624389 2278 ntBASIC16.09■□□□□ 0.17
A0A1W2PRF3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
A0A1W2PRF3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.09■□□□□ 0.17
A0A1W2PRF3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.09■□□□□ 0.17
A0A1W2PRF3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
A0A1W2PRF3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.09■□□□□ 0.17
A0A1W2PRF3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.09■□□□□ 0.17
A0A1W2PRF3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
A0A1W2PRF3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.09■□□□□ 0.17
A0A1W2PRF3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
A0A1W2PRF3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
A0A1W2PRF3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
A0A1W2PRF3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
A0A1W2PRF3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
A0A1W2PRF3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
A0A1W2PRF3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
A0A1W2PRF3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
A0A1W2PRF3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.08■□□□□ 0.17
A0A1W2PRF3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.08■□□□□ 0.16
A0A1W2PRF3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
A0A1W2PRF3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.08■□□□□ 0.16
A0A1W2PRF3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.08■□□□□ 0.16
A0A1W2PRF3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.08■□□□□ 0.16
A0A1W2PRF3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.08■□□□□ 0.16
A0A1W2PRF3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
A0A1W2PRF3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.08■□□□□ 0.16
A0A1W2PRF3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.08■□□□□ 0.16
A0A1W2PRF3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
A0A1W2PRF3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
A0A1W2PRF3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
A0A1W2PRF3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 AC099778.1-201ENST00000568593 1911 ntBASIC16.07■□□□□ 0.16
A0A1W2PRF3 AL691432.2-201ENST00000607222 2038 ntBASIC16.07■□□□□ 0.16
A0A1W2PRF3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.07■□□□□ 0.16
A0A1W2PRF3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
A0A1W2PRF3 AL596275.1-201ENST00000423464 877 ntBASIC16.07■□□□□ 0.16
A0A1W2PRF3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.07■□□□□ 0.16
A0A1W2PRF3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
A0A1W2PRF3 AC133681.1-201ENST00000465482 601 ntBASIC16.07■□□□□ 0.16
A0A1W2PRF3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.07■□□□□ 0.16
A0A1W2PRF3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
A0A1W2PRF3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms