Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 TERF1P5-201ENST00000477545 1207 ntBASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AC007322.4-201ENST00000509611 723 ntBASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AC105020.6-201ENST00000621523 1217 ntBASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 MYCNOS-205ENST00000641950 531 ntBASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AC004854.2-201ENST00000608450 1441 ntBASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 KRT19P1-201ENST00000405746 1186 ntBASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-1A0A0K0K1D8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 BICD1-207ENST00000551848 1962 ntBASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 UBE2DNL-204ENST00000602536 740 ntBASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-1A0A0K0K1D8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.63□□□□□ -0.07
TRBV6-1A0A0K0K1D8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms