Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 RNA5SP413-201ENST00000516373 109 ntBASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AL121906.2-201ENST00000621597 723 ntBASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AL032819.2-201ENST00000624543 2162 ntBASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV1D-43A0A0B4J1Z2 AP006587.1-201ENST00000534129 1502 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms