Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PHOX2BQ99453 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.01□□□□□ -1.13
PHOX2BQ99453 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
PHOX2BQ99453 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PHOX2BQ99453 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PHOX2BQ99453 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PHOX2BQ99453 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PHOX2BQ99453 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC8□□□□□ -1.13
PHOX2BQ99453 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC8□□□□□ -1.13
PHOX2BQ99453 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
PHOX2BQ99453 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8□□□□□ -1.13
PHOX2BQ99453 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 AC096992.2-201ENST00000609553 1684 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8□□□□□ -1.13
PHOX2BQ99453 RPL23AP32-201ENST00000395315 459 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
PHOX2BQ99453 FDPSP5-201ENST00000399474 1057 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC8□□□□□ -1.13
PHOX2BQ99453 MIR1282-201ENST00000408865 101 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 RNU6-272P-201ENST00000411028 104 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 AC127537.1-201ENST00000418183 748 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 AC018630.2-202ENST00000422992 927 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 GPM6BP2-201ENST00000432046 144 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC8□□□□□ -1.13
PHOX2BQ99453 GPM6BP1-201ENST00000446387 144 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 AC144530.1-201ENST00000452862 555 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 HIGD1AP8-201ENST00000453927 274 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC8□□□□□ -1.13
PHOX2BQ99453 RPL3P10-201ENST00000476002 1164 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 RPL7P6-201ENST00000480903 738 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 AC090096.1-201ENST00000489168 390 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 UBE2Q2P10-201ENST00000514854 900 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 SCARNA6.1-201ENST00000516989 238 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC8□□□□□ -1.13
PHOX2BQ99453 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8□□□□□ -1.13
PHOX2BQ99453 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 AC092868.1-201ENST00000557949 802 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC8□□□□□ -1.13
PHOX2BQ99453 AC126323.4-201ENST00000566935 234 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
PHOX2BQ99453 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC8□□□□□ -1.13
PHOX2BQ99453 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC8□□□□□ -1.13
PHOX2BQ99453 AC006116.6-201ENST00000593258 1103 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC8□□□□□ -1.13
PHOX2BQ99453 AC008638.3-201ENST00000603341 463 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 AC010591.1-201ENST00000603941 649 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 AC104237.2-201ENST00000612456 443 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 AL122125.1-201ENST00000616999 600 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 7SK.10-201ENST00000621414 298 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC8□□□□□ -1.13
PHOX2BQ99453 ABCA17P-204ENST00000494925 3478 ntBASIC8□□□□□ -1.13
PHOX2BQ99453 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
PHOX2BQ99453 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8□□□□□ -1.13
PHOX2BQ99453 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
PHOX2BQ99453 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8□□□□□ -1.13
PHOX2BQ99453 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8□□□□□ -1.13
PHOX2BQ99453 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
PHOX2BQ99453 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
PHOX2BQ99453 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
PHOX2BQ99453 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.99□□□□□ -1.13
PHOX2BQ99453 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC7.99□□□□□ -1.13
PHOX2BQ99453 RNU6-251P-201ENST00000363235 104 ntBASIC7.99□□□□□ -1.13
PHOX2BQ99453 RN7SKP50-201ENST00000364694 315 ntBASIC7.99□□□□□ -1.13
PHOX2BQ99453 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
PHOX2BQ99453 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.99□□□□□ -1.13
PHOX2BQ99453 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.99□□□□□ -1.13
PHOX2BQ99453 RN7SKP240-201ENST00000410583 375 ntBASIC7.99□□□□□ -1.13
PHOX2BQ99453 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC7.99□□□□□ -1.13
PHOX2BQ99453 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.99□□□□□ -1.13
PHOX2BQ99453 AC024082.2-201ENST00000434771 238 ntBASIC7.99□□□□□ -1.13
PHOX2BQ99453 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
PHOX2BQ99453 IFNA20P-201ENST00000436840 528 ntBASIC7.99□□□□□ -1.13
PHOX2BQ99453 GTF2IP13-201ENST00000438487 386 ntBASIC7.99□□□□□ -1.13
PHOX2BQ99453 Y_RNA.631-201ENST00000459607 101 ntBASIC7.99□□□□□ -1.13
PHOX2BQ99453 SNORD19B-201ENST00000459623 84 ntBASIC7.99□□□□□ -1.13
PHOX2BQ99453 MTCO2P29-201ENST00000465212 189 ntBASIC7.99□□□□□ -1.13
PHOX2BQ99453 RN7SL335P-201ENST00000482790 304 ntBASIC7.99□□□□□ -1.13
PHOX2BQ99453 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms