Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 SAMMSON-213ENST00000641336 1521 ntBASIC5.23□□□□□ -1.57
NUDCD3Q8IVD9 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 RNU4-2-201ENST00000365668 141 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AC004386.1-201ENST00000393214 761 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 RNU2-18P-201ENST00000411224 162 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 GSTM5P1-201ENST00000434751 660 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AC073909.1-201ENST00000447112 999 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AP006222.1-205ENST00000450734 457 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 LRRC37A14P-201ENST00000452297 462 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 LDHBP2-201ENST00000456969 1005 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AC108161.1-201ENST00000461060 402 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 RN7SL649P-201ENST00000496974 275 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 HMGB1P44-201ENST00000508597 572 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AC005341.1-201ENST00000571086 708 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AL118522.2-201ENST00000616045 615 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 YES1P1-201ENST00000418510 1628 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 AC006210.2-201ENST00000367074 1545 ntBASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NUDCD3Q8IVD9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NUDCD3Q8IVD9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NUDCD3Q8IVD9 AL672167.1-204ENST00000641875 3017 ntBASIC5.21□□□□□ -1.57
NUDCD3Q8IVD9 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.21□□□□□ -1.57
NUDCD3Q8IVD9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 RN7SKP28-201ENST00000364770 305 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AC234781.4-201ENST00000419384 244 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 SRSF1P1-201ENST00000424058 520 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 SETP10-201ENST00000424368 814 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 NANOGP4-201ENST00000427230 913 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AL359839.1-201ENST00000451975 1160 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AC079168.1-201ENST00000458741 345 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 RN7SL189P-201ENST00000468631 289 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 RN7SL423P-201ENST00000486202 304 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 RN7SKP99-201ENST00000517028 307 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AC011853.1-201ENST00000518911 454 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 RBM22P12-201ENST00000567098 1255 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AP001496.3-201ENST00000580230 913 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 RN7SL708P-201ENST00000580952 299 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AC011840.5-201ENST00000582125 771 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AC005252.1-201ENST00000604518 1063 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AC009779.8-202ENST00000607990 932 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 MIR7109-201ENST00000613748 65 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AC037198.3-201ENST00000616754 526 ntBASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NUDCD3Q8IVD9 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 RNA5SP296-201ENST00000410523 111 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 SETP15-201ENST00000412724 337 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 VN1R96P-201ENST00000446052 858 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms