RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 AEBP2Q6ZN18 517 aaPredicted RBP26.58■■□□□ 1.85
PCGEM1-201ENST00000454040 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
PCGEM1-201ENST00000454040 SENP3Q9H4L4 574 aaPredicted RBP22.91■■□□□ 1.26
PCGEM1-201ENST00000454040 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
PCGEM1-201ENST00000454040 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
PCGEM1-201ENST00000454040 FOXD1Q16676 465 aa21.4■■□□□ 1.02
PCGEM1-201ENST00000454040 MSH5O43196 834 aa20.46■□□□□ 0.87
PCGEM1-201ENST00000454040 PIAS4Q8N2W9 510 aaPredicted RBP19.79■□□□□ 0.76
PCGEM1-201ENST00000454040 PPP6R1Q9UPN7 881 aa19.28■□□□□ 0.68
PCGEM1-201ENST00000454040 ADRA2BP18089 450 aa19.17■□□□□ 0.66
PCGEM1-201ENST00000454040 PLPPR3Q6T4P5 718 aa19.13■□□□□ 0.65
PCGEM1-201ENST00000454040 CACNB1Q02641 598 aaPredicted RBP18.07■□□□□ 0.48
PCGEM1-201ENST00000454040 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
PCGEM1-201ENST00000454040 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
PCGEM1-201ENST00000454040 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
PCGEM1-201ENST00000454040 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
PCGEM1-201ENST00000454040 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
PCGEM1-201ENST00000454040 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
PCGEM1-201ENST00000454040 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
PCGEM1-201ENST00000454040 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
PCGEM1-201ENST00000454040 POTEHQ6S545 545 aa16.64■□□□□ 0.25
PCGEM1-201ENST00000454040 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
PCGEM1-201ENST00000454040 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
PCGEM1-201ENST00000454040 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
PCGEM1-201ENST00000454040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.18
PCGEM1-201ENST00000454040 DSG3P32926 999 aa15.92■□□□□ 0.14
PCGEM1-201ENST00000454040 CAPN15O75808 1086 aa15.79■□□□□ 0.12
PCGEM1-201ENST00000454040 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.11
PCGEM1-201ENST00000454040 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
PCGEM1-201ENST00000454040 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
PCGEM1-201ENST00000454040 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
PCGEM1-201ENST00000454040 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
PCGEM1-201ENST00000454040 APLP2Q06481 763 aa15.31■□□□□ 0.04
PCGEM1-201ENST00000454040 ABCB7O75027 752 aa15.3■□□□□ 0.04
PCGEM1-201ENST00000454040 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
PCGEM1-201ENST00000454040 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
PCGEM1-201ENST00000454040 CHRDL2Q6WN34 429 aa15.24■□□□□ 0.03
PCGEM1-201ENST00000454040 SP7Q8TDD2 431 aaPredicted RBP15.18■□□□□ 0.02
PCGEM1-201ENST00000454040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
PCGEM1-201ENST00000454040 HNRNPUL2Q1KMD3 747 aaKnown RBP15.05■□□□□ -0
PCGEM1-201ENST00000454040 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
PCGEM1-201ENST00000454040 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
PCGEM1-201ENST00000454040 AKT1S1Q96B36 256 aa14.71□□□□□ -0.05
PCGEM1-201ENST00000454040 POLA2Q14181 598 aa14.7□□□□□ -0.06
PCGEM1-201ENST00000454040 PIP4P2Q8N4L2 257 aa14.68□□□□□ -0.06
PCGEM1-201ENST00000454040 HAX1O00165 279 aa14.67□□□□□ -0.06
PCGEM1-201ENST00000454040 REM2Q8IYK8 340 aaPredicted RBP14.54□□□□□ -0.08
PCGEM1-201ENST00000454040 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.09
PCGEM1-201ENST00000454040 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
PCGEM1-201ENST00000454040 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
PCGEM1-201ENST00000454040 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
PCGEM1-201ENST00000454040 EVX2Q03828 476 aa14.35□□□□□ -0.11
PCGEM1-201ENST00000454040 KCNA4P22459 653 aa14.33□□□□□ -0.12
PCGEM1-201ENST00000454040 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
PCGEM1-201ENST00000454040 LHX8Q68G74 356 aa14.23□□□□□ -0.13
PCGEM1-201ENST00000454040 PLSCR2Q9NRY7 297 aa14.05□□□□□ -0.16
PCGEM1-201ENST00000454040 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
PCGEM1-201ENST00000454040 GABBR2O75899 941 aa14.04□□□□□ -0.16
PCGEM1-201ENST00000454040 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.16
PCGEM1-201ENST00000454040 PRKAR2AP13861 404 aaKnown RBP14□□□□□ -0.17
PCGEM1-201ENST00000454040 SPDYE2BA6NHP3 402 aa13.85□□□□□ -0.19
PCGEM1-201ENST00000454040 SPDYE6P0CI01 402 aa13.85□□□□□ -0.19
PCGEM1-201ENST00000454040 SPDYE2Q495Y8 402 aa13.85□□□□□ -0.19
PCGEM1-201ENST00000454040 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.19
PCGEM1-201ENST00000454040 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
PCGEM1-201ENST00000454040 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
PCGEM1-201ENST00000454040 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
PCGEM1-201ENST00000454040 FBLN2P98095 1184 aa13.64□□□□□ -0.23
PCGEM1-201ENST00000454040 CLCN6P51797 869 aa13.62□□□□□ -0.23
PCGEM1-201ENST00000454040 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
PCGEM1-201ENST00000454040 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
PCGEM1-201ENST00000454040 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
PCGEM1-201ENST00000454040 CD44P16070 742 aaKnown RBP13.51□□□□□ -0.25
PCGEM1-201ENST00000454040 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
PCGEM1-201ENST00000454040 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
PCGEM1-201ENST00000454040 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
PCGEM1-201ENST00000454040 POTEMA6NI47 508 aa13.43□□□□□ -0.26
PCGEM1-201ENST00000454040 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
PCGEM1-201ENST00000454040 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
PCGEM1-201ENST00000454040 FARP1Q9Y4F1 1045 aaPredicted RBP13.37□□□□□ -0.27
PCGEM1-201ENST00000454040 POTEGQ6S5H5 508 aa13.36□□□□□ -0.27
PCGEM1-201ENST00000454040 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
PCGEM1-201ENST00000454040 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
PCGEM1-201ENST00000454040 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCGEM1-201ENST00000454040 ZNF579Q8NAF0 562 aaKnown RBP13.28□□□□□ -0.28
PCGEM1-201ENST00000454040 POTEB2H3BUK9 544 aa13.21□□□□□ -0.29
PCGEM1-201ENST00000454040 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
PCGEM1-201ENST00000454040 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
PCGEM1-201ENST00000454040 ZBTB22O15209 634 aa13.12□□□□□ -0.31
PCGEM1-201ENST00000454040 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
PCGEM1-201ENST00000454040 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
PCGEM1-201ENST00000454040 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
PCGEM1-201ENST00000454040 LCE2DQ5TA82 110 aaPredicted RBP12.92□□□□□ -0.34
PCGEM1-201ENST00000454040 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
PCGEM1-201ENST00000454040 METRNQ9UJH8 293 aa12.9□□□□□ -0.34
PCGEM1-201ENST00000454040 FAM163AQ96GL9 167 aaPredicted RBP12.9□□□□□ -0.35
PCGEM1-201ENST00000454040 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
PCGEM1-201ENST00000454040 C7P10643 843 aa12.88□□□□□ -0.35
PCGEM1-201ENST00000454040 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
PCGEM1-201ENST00000454040 SLC39A7Q92504 469 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms