RNA–Protein interactions for RNA: ENST00000517028.1

RN7SKP99-201, Transcript of RNA, 7SK small nuclear pseudogene 99, humanhuman

BASIC

Gene RN7SKP99, Length 307 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP99-201ENST00000517028 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
RN7SKP99-201ENST00000517028 CHIC1Q5VXU3 224 aa17.19■□□□□ 0.34
RN7SKP99-201ENST00000517028 PHF23Q9BUL5 403 aaPredicted RBP15.14■□□□□ 0.01
RN7SKP99-201ENST00000517028 SENP3Q9H4L4 574 aaPredicted RBP14.98□□□□□ -0.01
RN7SKP99-201ENST00000517028 PLPPR3Q6T4P5 718 aa13.94□□□□□ -0.18
RN7SKP99-201ENST00000517028 FOXD1Q16676 465 aa13.93□□□□□ -0.18
RN7SKP99-201ENST00000517028 PPP6R1Q9UPN7 881 aa13.38□□□□□ -0.27
RN7SKP99-201ENST00000517028 ADRA2BP18089 450 aa13.37□□□□□ -0.27
RN7SKP99-201ENST00000517028 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
RN7SKP99-201ENST00000517028 NISCHQ9Y2I1 1504 aa12.87□□□□□ -0.35
RN7SKP99-201ENST00000517028 MSH5O43196 834 aa12.83□□□□□ -0.36
RN7SKP99-201ENST00000517028 PPP4R3CPQ6ZMV5 832 aa12.29□□□□□ -0.44
RN7SKP99-201ENST00000517028 SCAF1Q9H7N4 1312 aaKnown RBP12.17□□□□□ -0.46
RN7SKP99-201ENST00000517028 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
RN7SKP99-201ENST00000517028 KCNA4P22459 653 aa11.97□□□□□ -0.49
RN7SKP99-201ENST00000517028 DMRT2Q9Y5R5 561 aa11.95□□□□□ -0.5
RN7SKP99-201ENST00000517028 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
RN7SKP99-201ENST00000517028 NCBP3Q53F19 620 aaKnown RBP11.93□□□□□ -0.5
RN7SKP99-201ENST00000517028 POTEDQ86YR6 584 aa11.8□□□□□ -0.52
RN7SKP99-201ENST00000517028 NPM3O75607 178 aaKnown RBP11.79□□□□□ -0.52
RN7SKP99-201ENST00000517028 RNF216Q9NWF9 866 aaPredicted RBP11.71□□□□□ -0.53
RN7SKP99-201ENST00000517028 HOXD11P31277 338 aaPredicted RBP11.68□□□□□ -0.54
RN7SKP99-201ENST00000517028 DCAF8L1A6NGE4 600 aa11.48□□□□□ -0.57
RN7SKP99-201ENST00000517028 CCDC180Q9P1Z9 1646 aa11.43□□□□□ -0.58
RN7SKP99-201ENST00000517028 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
RN7SKP99-201ENST00000517028 DNAJC5BQ9UF47 199 aa11.38□□□□□ -0.59
RN7SKP99-201ENST00000517028 ABCC9O60706 1549 aa11.33□□□□□ -0.6
RN7SKP99-201ENST00000517028 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.62
RN7SKP99-201ENST00000517028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.15□□□□□ -0.62
RN7SKP99-201ENST00000517028 SLC4A2P04920 1241 aa11.14□□□□□ -0.63
RN7SKP99-201ENST00000517028 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
RN7SKP99-201ENST00000517028 ZBTB22O15209 634 aa11.03□□□□□ -0.64
RN7SKP99-201ENST00000517028 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
RN7SKP99-201ENST00000517028 FOXD4L1Q9NU39 408 aa11.01□□□□□ -0.65
RN7SKP99-201ENST00000517028 U3KPZ7 1027 aaPredicted RBP10.97□□□□□ -0.65
RN7SKP99-201ENST00000517028 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
RN7SKP99-201ENST00000517028 MYCNP04198 464 aaPredicted RBP10.88□□□□□ -0.67
RN7SKP99-201ENST00000517028 C1QBPQ07021 282 aaKnown RBP10.85□□□□□ -0.67
RN7SKP99-201ENST00000517028 RB1CC1Q8TDY2 1594 aa10.85□□□□□ -0.67
RN7SKP99-201ENST00000517028 NACADO15069 1562 aa10.77□□□□□ -0.68
RN7SKP99-201ENST00000517028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.77□□□□□ -0.69
RN7SKP99-201ENST00000517028 HNRNPUL2Q1KMD3 747 aaKnown RBP10.77□□□□□ -0.69
RN7SKP99-201ENST00000517028 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
RN7SKP99-201ENST00000517028 SAMD1Q6SPF0 538 aaPredicted RBP10.74□□□□□ -0.69
RN7SKP99-201ENST00000517028 SPINK5Q9NQ38 1064 aaPredicted RBP10.7□□□□□ -0.7
RN7SKP99-201ENST00000517028 ZCCHC6Q5VYS8 1495 aaKnown RBP10.68□□□□□ -0.7
RN7SKP99-201ENST00000517028 APLP2Q06481 763 aa10.67□□□□□ -0.7
RN7SKP99-201ENST00000517028 CAPN15O75808 1086 aa10.64□□□□□ -0.71
RN7SKP99-201ENST00000517028 PABPN1Q86U42 306 aaKnown RBP eCLIP10.64□□□□□ -0.71
RN7SKP99-201ENST00000517028 ATF5Q9Y2D1 282 aaPredicted RBP10.63□□□□□ -0.71
RN7SKP99-201ENST00000517028 ATXN8OSP0DMR3 200 aa10.6□□□□□ -0.71
RN7SKP99-201ENST00000517028 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
RN7SKP99-201ENST00000517028 MYO15BQ96JP2 1530 aa10.57□□□□□ -0.72
RN7SKP99-201ENST00000517028 SCRIBQ14160 1630 aa10.56□□□□□ -0.72
RN7SKP99-201ENST00000517028 DCAF1Q9Y4B6 1507 aa10.55□□□□□ -0.72
RN7SKP99-201ENST00000517028 ZNF219Q9P2Y4 722 aaPredicted RBP10.55□□□□□ -0.72
RN7SKP99-201ENST00000517028 UNC13AQ9UPW8 1703 aa10.51□□□□□ -0.73
RN7SKP99-201ENST00000517028 ABCB7O75027 752 aa10.46□□□□□ -0.73
RN7SKP99-201ENST00000517028 DSG3P32926 999 aa10.46□□□□□ -0.73
RN7SKP99-201ENST00000517028 SHROOM4Q9ULL8 1493 aa10.43□□□□□ -0.74
RN7SKP99-201ENST00000517028 POLA2Q14181 598 aa10.4□□□□□ -0.74
RN7SKP99-201ENST00000517028 BICRAQ9NZM4 1560 aa10.36□□□□□ -0.75
RN7SKP99-201ENST00000517028 EIF4G1Q04637 1599 aaKnown RBP10.18□□□□□ -0.78
RN7SKP99-201ENST00000517028 ZBTB12Q9Y330 459 aaPredicted RBP10.18□□□□□ -0.78
RN7SKP99-201ENST00000517028 CC2D2AQ9P2K1 1620 aa10.17□□□□□ -0.78
RN7SKP99-201ENST00000517028 MKRN4PQ13434 485 aaPredicted RBP10.15□□□□□ -0.78
RN7SKP99-201ENST00000517028 CECR2Q9BXF3 1484 aa10.15□□□□□ -0.78
RN7SKP99-201ENST00000517028 FBLN2P98095 1184 aa10.14□□□□□ -0.79
RN7SKP99-201ENST00000517028 OSCARQ8IYS5 282 aa10.07□□□□□ -0.8
RN7SKP99-201ENST00000517028 BAZ1AQ9NRL2 1556 aaPredicted RBP10.02□□□□□ -0.81
RN7SKP99-201ENST00000517028 SMARCA4P51532 1647 aa10□□□□□ -0.81
RN7SKP99-201ENST00000517028 SMARCA2P51531 1590 aa9.97□□□□□ -0.81
RN7SKP99-201ENST00000517028 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
RN7SKP99-201ENST00000517028 BAZ1BQ9UIG0 1483 aaKnown RBP9.95□□□□□ -0.82
RN7SKP99-201ENST00000517028 MROH2BQ7Z745 1585 aa9.93□□□□□ -0.82
RN7SKP99-201ENST00000517028 ATAD2BQ9ULI0 1458 aa9.93□□□□□ -0.82
RN7SKP99-201ENST00000517028 SPDYE2BA6NHP3 402 aa9.92□□□□□ -0.82
RN7SKP99-201ENST00000517028 SPDYE6P0CI01 402 aa9.92□□□□□ -0.82
RN7SKP99-201ENST00000517028 SPDYE2Q495Y8 402 aa9.92□□□□□ -0.82
RN7SKP99-201ENST00000517028 SPDYE4A6NLX3 237 aa9.89□□□□□ -0.83
RN7SKP99-201ENST00000517028 ZNF692Q9BU19 519 aaPredicted RBP9.89□□□□□ -0.83
RN7SKP99-201ENST00000517028 NCAPD3P42695 1498 aa9.89□□□□□ -0.83
RN7SKP99-201ENST00000517028 SUPT5HO00267 1087 aaKnown RBP9.88□□□□□ -0.83
RN7SKP99-201ENST00000517028 WIZO95785 1651 aa9.87□□□□□ -0.83
RN7SKP99-201ENST00000517028 FKBP8Q14318 412 aa9.87□□□□□ -0.83
RN7SKP99-201ENST00000517028 HMGXB3Q12766 1538 aa9.85□□□□□ -0.83
RN7SKP99-201ENST00000517028 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
RN7SKP99-201ENST00000517028 SSUH2Q9Y2M2 353 aa9.84□□□□□ -0.83
RN7SKP99-201ENST00000517028 AKT1S1Q96B36 256 aa9.82□□□□□ -0.84
RN7SKP99-201ENST00000517028 RSF1Q96T23 1441 aaPredicted RBP9.82□□□□□ -0.84
RN7SKP99-201ENST00000517028 PEG3Q9GZU2 1588 aa9.79□□□□□ -0.84
RN7SKP99-201ENST00000517028 REM2Q8IYK8 340 aaPredicted RBP9.75□□□□□ -0.85
RN7SKP99-201ENST00000517028 TOP2AP11388 1531 aaKnown RBP9.74□□□□□ -0.85
RN7SKP99-201ENST00000517028 NESP48681 1621 aa9.74□□□□□ -0.85
RN7SKP99-201ENST00000517028 PROM2Q8N271 834 aa9.7□□□□□ -0.86
RN7SKP99-201ENST00000517028 PDS5BQ9NTI5 1447 aa9.7□□□□□ -0.86
RN7SKP99-201ENST00000517028 LAMC3Q9Y6N6 1575 aa9.69□□□□□ -0.86
RN7SKP99-201ENST00000517028 CADPSQ9ULU8 1353 aa9.68□□□□□ -0.86
RN7SKP99-201ENST00000517028 PITPNM1O00562 1244 aa9.65□□□□□ -0.86
RN7SKP99-201ENST00000517028 CCDC88BA6NC98 1476 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms