Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
COL8A1P27658 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 AC012467.2-201ENST00000607783 2583 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 ITPK1-AS1-201ENST00000553639 4701 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC6.65□□□□□ -1.34
COL8A1P27658 USP3-201ENST00000268049 5311 ntTSL 5 BASIC6.65□□□□□ -1.34
COL8A1P27658 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC6.65□□□□□ -1.34
COL8A1P27658 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
COL8A1P27658 AL391666.1-201ENST00000442570 2764 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC6.65□□□□□ -1.34
COL8A1P27658 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
COL8A1P27658 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 OR5M2P-202ENST00000641241 4242 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
COL8A1P27658 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
COL8A1P27658 RNU6-1026P-201ENST00000384465 108 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 RNA5SP185-201ENST00000390963 114 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AC087752.1-201ENST00000391360 558 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 RNU6-373P-201ENST00000411247 98 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AL355862.1-201ENST00000412705 353 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 AL672212.1-201ENST00000422246 400 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.65□□□□□ -1.34
COL8A1P27658 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
COL8A1P27658 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 RPL7P11-201ENST00000437586 658 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 HMGB3P12-201ENST00000438745 556 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.65□□□□□ -1.34
COL8A1P27658 AC083855.1-201ENST00000440041 258 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 GCNT1P5-201ENST00000449274 682 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.65□□□□□ -1.34
COL8A1P27658 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.65□□□□□ -1.34
COL8A1P27658 RPS16P9-201ENST00000477220 427 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 RN7SL152P-201ENST00000484176 298 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AC007182.2-201ENST00000489251 402 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 RN7SL518P-201ENST00000491887 280 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.65□□□□□ -1.34
COL8A1P27658 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC6.65□□□□□ -1.34
COL8A1P27658 AC010587.1-201ENST00000505809 469 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC6.65□□□□□ -1.34
COL8A1P27658 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.65□□□□□ -1.34
COL8A1P27658 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.65□□□□□ -1.34
COL8A1P27658 YWHABP2-201ENST00000540201 713 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.65□□□□□ -1.34
COL8A1P27658 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.65□□□□□ -1.34
COL8A1P27658 AC069240.2-201ENST00000550242 609 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.65□□□□□ -1.34
COL8A1P27658 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.65□□□□□ -1.34
COL8A1P27658 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.65□□□□□ -1.34
COL8A1P27658 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC6.65□□□□□ -1.34
COL8A1P27658 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.65□□□□□ -1.34
COL8A1P27658 MYL12BP1-201ENST00000569826 507 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL8A1P27658 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.65□□□□□ -1.34
COL8A1P27658 AL080274.1-201ENST00000605565 220 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AL627309.6-201ENST00000606857 840 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.65□□□□□ -1.34
COL8A1P27658 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.65□□□□□ -1.34
COL8A1P27658 RNVU1-19-201ENST00000613023 167 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 MIR6861-201ENST00000618657 64 ntBASIC6.65□□□□□ -1.34
COL8A1P27658 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.65□□□□□ -1.34
COL8A1P27658 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL8A1P27658 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
COL8A1P27658 GTF2IP1-202ENST00000614592 2047 ntBASIC6.65□□□□□ -1.35
COL8A1P27658 ZSWIM5P3-201ENST00000511265 2743 ntBASIC6.65□□□□□ -1.35
COL8A1P27658 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL8A1P27658 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.65□□□□□ -1.35
COL8A1P27658 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC6.65□□□□□ -1.35
COL8A1P27658 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC6.65□□□□□ -1.35
COL8A1P27658 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL8A1P27658 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC6.65□□□□□ -1.35
COL8A1P27658 LYARP1-201ENST00000436977 1501 ntBASIC6.65□□□□□ -1.35
COL8A1P27658 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.65□□□□□ -1.35
COL8A1P27658 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
COL8A1P27658 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL8A1P27658 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC6.65□□□□□ -1.35
COL8A1P27658 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC6.65□□□□□ -1.35
COL8A1P27658 MTND5P27-201ENST00000428871 1720 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.64□□□□□ -1.35
COL8A1P27658 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
COL8A1P27658 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC6.64□□□□□ -1.35
COL8A1P27658 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
COL8A1P27658 AC006141.1-201ENST00000581917 2170 ntBASIC6.64□□□□□ -1.35
COL8A1P27658 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
COL8A1P27658 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL8A1P27658 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms