RNA–Protein interactions for RNA: ENST00000609132.1

LINC00649-214, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 668 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-214ENST00000609132 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
LINC00649-214ENST00000609132 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
LINC00649-214ENST00000609132 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
LINC00649-214ENST00000609132 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
LINC00649-214ENST00000609132 FOXD1Q16676 465 aa17.72■□□□□ 0.43
LINC00649-214ENST00000609132 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
LINC00649-214ENST00000609132 MSH5O43196 834 aa16.92■□□□□ 0.3
LINC00649-214ENST00000609132 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
LINC00649-214ENST00000609132 PPP6R1Q9UPN7 881 aa16.02■□□□□ 0.16
LINC00649-214ENST00000609132 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
LINC00649-214ENST00000609132 ADRA2BP18089 450 aa15.97■□□□□ 0.15
LINC00649-214ENST00000609132 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
LINC00649-214ENST00000609132 CACNB1Q02641 598 aaPredicted RBP14.91□□□□□ -0.02
LINC00649-214ENST00000609132 MAPK8IP2Q13387 824 aaPredicted RBP14.84□□□□□ -0.03
LINC00649-214ENST00000609132 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
LINC00649-214ENST00000609132 DCAF8L1A6NGE4 600 aa14.42□□□□□ -0.1
LINC00649-214ENST00000609132 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
LINC00649-214ENST00000609132 HOXD11P31277 338 aaPredicted RBP14.11□□□□□ -0.15
LINC00649-214ENST00000609132 C1QBPQ07021 282 aaKnown RBP14.1□□□□□ -0.15
LINC00649-214ENST00000609132 PPP4R3CPQ6ZMV5 832 aa13.91□□□□□ -0.18
LINC00649-214ENST00000609132 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
LINC00649-214ENST00000609132 CNKSR2Q8WXI2 1034 aa13.81□□□□□ -0.2
LINC00649-214ENST00000609132 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
LINC00649-214ENST00000609132 POTEHQ6S545 545 aa13.66□□□□□ -0.22
LINC00649-214ENST00000609132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC00649-214ENST00000609132 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
LINC00649-214ENST00000609132 DSG3P32926 999 aa13.19□□□□□ -0.3
LINC00649-214ENST00000609132 CAPN15O75808 1086 aa13.17□□□□□ -0.3
LINC00649-214ENST00000609132 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
LINC00649-214ENST00000609132 KCNA4P22459 653 aa13.16□□□□□ -0.3
LINC00649-214ENST00000609132 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
LINC00649-214ENST00000609132 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
LINC00649-214ENST00000609132 ABCB7O75027 752 aa12.79□□□□□ -0.36
LINC00649-214ENST00000609132 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
LINC00649-214ENST00000609132 APLP2Q06481 763 aa12.78□□□□□ -0.36
LINC00649-214ENST00000609132 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
LINC00649-214ENST00000609132 RBM42Q9BTD8 480 aaKnown RBP12.69□□□□□ -0.38
LINC00649-214ENST00000609132 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
LINC00649-214ENST00000609132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
LINC00649-214ENST00000609132 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
LINC00649-214ENST00000609132 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
LINC00649-214ENST00000609132 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
LINC00649-214ENST00000609132 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
LINC00649-214ENST00000609132 SLC4A1APQ9BWU0 796 aaKnown RBP12.41□□□□□ -0.42
LINC00649-214ENST00000609132 POLA2Q14181 598 aa12.26□□□□□ -0.45
LINC00649-214ENST00000609132 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
LINC00649-214ENST00000609132 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
LINC00649-214ENST00000609132 HAX1O00165 279 aa12.15□□□□□ -0.46
LINC00649-214ENST00000609132 ZBTB22O15209 634 aa12.15□□□□□ -0.46
LINC00649-214ENST00000609132 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
LINC00649-214ENST00000609132 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
LINC00649-214ENST00000609132 REM2Q8IYK8 340 aaPredicted RBP12.08□□□□□ -0.48
LINC00649-214ENST00000609132 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
LINC00649-214ENST00000609132 PITPNM1O00562 1244 aa11.97□□□□□ -0.49
LINC00649-214ENST00000609132 FXR2P51116 673 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC00649-214ENST00000609132 ATF5Q9Y2D1 282 aaPredicted RBP11.95□□□□□ -0.5
LINC00649-214ENST00000609132 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
LINC00649-214ENST00000609132 EVX2Q03828 476 aa11.85□□□□□ -0.51
LINC00649-214ENST00000609132 CSRNP3Q8WYN3 585 aa11.77□□□□□ -0.53
LINC00649-214ENST00000609132 EHMT2Q96KQ7 1210 aa11.75□□□□□ -0.53
LINC00649-214ENST00000609132 LHX8Q68G74 356 aa11.71□□□□□ -0.53
LINC00649-214ENST00000609132 PRKAR2AP13861 404 aaKnown RBP11.67□□□□□ -0.54
LINC00649-214ENST00000609132 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
LINC00649-214ENST00000609132 C19orf67A6NJJ6 358 aa11.61□□□□□ -0.55
LINC00649-214ENST00000609132 GABBR2O75899 941 aa11.6□□□□□ -0.55
LINC00649-214ENST00000609132 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
LINC00649-214ENST00000609132 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
LINC00649-214ENST00000609132 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
LINC00649-214ENST00000609132 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
LINC00649-214ENST00000609132 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
LINC00649-214ENST00000609132 SPDYE1Q8NFV5 336 aaPredicted RBP11.55□□□□□ -0.56
LINC00649-214ENST00000609132 FBLN2P98095 1184 aa11.46□□□□□ -0.57
LINC00649-214ENST00000609132 MKRN4PQ13434 485 aaPredicted RBP11.38□□□□□ -0.59
LINC00649-214ENST00000609132 CHADLQ6NUI6 762 aa11.37□□□□□ -0.59
LINC00649-214ENST00000609132 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
LINC00649-214ENST00000609132 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
LINC00649-214ENST00000609132 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
LINC00649-214ENST00000609132 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
LINC00649-214ENST00000609132 PRR29P0C7W0 189 aa11.26□□□□□ -0.61
LINC00649-214ENST00000609132 CLCN6P51797 869 aa11.24□□□□□ -0.61
LINC00649-214ENST00000609132 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
LINC00649-214ENST00000609132 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
LINC00649-214ENST00000609132 PABPN1Q86U42 306 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC00649-214ENST00000609132 POTEMA6NI47 508 aa11.08□□□□□ -0.64
LINC00649-214ENST00000609132 ZNF579Q8NAF0 562 aaKnown RBP11.05□□□□□ -0.64
LINC00649-214ENST00000609132 OTUD5Q96G74 571 aa11.04□□□□□ -0.64
LINC00649-214ENST00000609132 POTEGQ6S5H5 508 aa11.03□□□□□ -0.64
LINC00649-214ENST00000609132 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
LINC00649-214ENST00000609132 GALR2O43603 387 aaPredicted RBP10.94□□□□□ -0.66
LINC00649-214ENST00000609132 PCDH10Q9P2E7 1040 aa10.93□□□□□ -0.66
LINC00649-214ENST00000609132 POTEB2H3BUK9 544 aa10.92□□□□□ -0.66
LINC00649-214ENST00000609132 SPDYE4A6NLX3 237 aa10.89□□□□□ -0.67
LINC00649-214ENST00000609132 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.68
LINC00649-214ENST00000609132 CREBZFQ9NS37 354 aa10.79□□□□□ -0.68
LINC00649-214ENST00000609132 PHF12Q96QT6 1004 aa10.78□□□□□ -0.68
LINC00649-214ENST00000609132 MAMSTRQ6ZN01 415 aa10.75□□□□□ -0.69
LINC00649-214ENST00000609132 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
LINC00649-214ENST00000609132 PELP1Q8IZL8 1130 aaKnown RBP10.74□□□□□ -0.69
LINC00649-214ENST00000609132 SLC39A7Q92504 469 aa10.71□□□□□ -0.69
LINC00649-214ENST00000609132 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms