Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.85□□□□□ -1.31
ABCA3Q99758 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.85□□□□□ -1.31
ABCA3Q99758 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ABCA3Q99758 TVP23CP2-201ENST00000571473 623 ntBASIC6.85□□□□□ -1.31
ABCA3Q99758 SS18L2P2-201ENST00000583960 235 ntBASIC6.85□□□□□ -1.31
ABCA3Q99758 EIF1P5-201ENST00000585002 234 ntBASIC6.85□□□□□ -1.31
ABCA3Q99758 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.85□□□□□ -1.31
ABCA3Q99758 AC060780.2-201ENST00000589047 198 ntBASIC6.85□□□□□ -1.31
ABCA3Q99758 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ABCA3Q99758 MLECP1-201ENST00000615893 709 ntBASIC6.85□□□□□ -1.31
ABCA3Q99758 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ABCA3Q99758 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.85□□□□□ -1.31
ABCA3Q99758 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.85□□□□□ -1.31
ABCA3Q99758 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.85□□□□□ -1.31
ABCA3Q99758 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ABCA3Q99758 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.85□□□□□ -1.31
ABCA3Q99758 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ABCA3Q99758 RPL11P3-201ENST00000395256 523 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.84□□□□□ -1.31
ABCA3Q99758 FABP7P1-201ENST00000424004 391 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
ABCA3Q99758 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.84□□□□□ -1.31
ABCA3Q99758 AL161722.2-201ENST00000434731 981 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.84□□□□□ -1.31
ABCA3Q99758 RN7SL41P-201ENST00000476144 297 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 OR11I1P-201ENST00000486033 954 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.84□□□□□ -1.31
ABCA3Q99758 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.84□□□□□ -1.31
ABCA3Q99758 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.84□□□□□ -1.31
ABCA3Q99758 BNIP3P35-201ENST00000604530 490 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 AC006338.2-201ENST00000616864 791 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ABCA3Q99758 AL359195.2-201ENST00000623657 4412 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ABCA3Q99758 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
ABCA3Q99758 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
ABCA3Q99758 AC104162.1-201ENST00000430831 2382 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ABCA3Q99758 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
ABCA3Q99758 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ABCA3Q99758 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.84□□□□□ -1.31
ABCA3Q99758 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ABCA3Q99758 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.84□□□□□ -1.31
ABCA3Q99758 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.84□□□□□ -1.31
ABCA3Q99758 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ABCA3Q99758 AL158152.1-201ENST00000602652 1435 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
ABCA3Q99758 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ABCA3Q99758 RNU1-59P-201ENST00000364829 162 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 RN7SKP27-201ENST00000410684 333 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 CYCSP11-201ENST00000436426 315 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.84□□□□□ -1.31
ABCA3Q99758 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.84□□□□□ -1.31
ABCA3Q99758 EIF2S2P2-201ENST00000447161 982 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.84□□□□□ -1.31
ABCA3Q99758 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.84□□□□□ -1.31
ABCA3Q99758 SLC25A18P1-201ENST00000449385 454 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 AC005412.2-201ENST00000492004 341 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 AL109618.2-201ENST00000605527 211 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 U1.25-201ENST00000614085 162 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 U1.34-201ENST00000618578 162 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 U1.31-201ENST00000620022 160 ntBASIC6.84□□□□□ -1.31
ABCA3Q99758 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.84□□□□□ -1.31
ABCA3Q99758 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.84□□□□□ -1.31
ABCA3Q99758 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.84□□□□□ -1.31
ABCA3Q99758 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.84□□□□□ -1.32
ABCA3Q99758 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
ABCA3Q99758 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
ABCA3Q99758 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.83□□□□□ -1.32
ABCA3Q99758 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ABCA3Q99758 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ABCA3Q99758 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ABCA3Q99758 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.83□□□□□ -1.32
ABCA3Q99758 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.83□□□□□ -1.32
ABCA3Q99758 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
ABCA3Q99758 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ABCA3Q99758 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ABCA3Q99758 AC003973.3-201ENST00000624863 2822 ntBASIC6.83□□□□□ -1.32
ABCA3Q99758 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
ABCA3Q99758 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ABCA3Q99758 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ABCA3Q99758 RNA5SP515-201ENST00000364570 118 ntBASIC6.83□□□□□ -1.32
ABCA3Q99758 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.83□□□□□ -1.32
ABCA3Q99758 RN7SKP106-201ENST00000410832 272 ntBASIC6.83□□□□□ -1.32
ABCA3Q99758 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.83□□□□□ -1.32
ABCA3Q99758 AC000111.2-201ENST00000448200 210 ntBASIC6.83□□□□□ -1.32
ABCA3Q99758 TCEA1P1-201ENST00000449716 880 ntBASIC6.83□□□□□ -1.32
ABCA3Q99758 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.83□□□□□ -1.32
ABCA3Q99758 RPL10P17-201ENST00000453852 316 ntBASIC6.83□□□□□ -1.32
ABCA3Q99758 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.83□□□□□ -1.32
ABCA3Q99758 OR8G5-201ENST00000524943 1041 ntBASIC6.83□□□□□ -1.32
ABCA3Q99758 NPM1P42-201ENST00000560329 862 ntBASIC6.83□□□□□ -1.32
ABCA3Q99758 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.83□□□□□ -1.32
ABCA3Q99758 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.83□□□□□ -1.32
ABCA3Q99758 AL590392.1-201ENST00000604960 446 ntBASIC6.83□□□□□ -1.32
ABCA3Q99758 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
ABCA3Q99758 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms