RNA–Protein interactions for RNA: ENST00000454489.1

AC099344.3-201, humanhuman

TSL 3 BASIC

Gene AC099344.3, Length 626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC099344.3-201ENST00000454489 NISCHQ9Y2I1 1504 aa12.26□□□□□ -0.45
AC099344.3-201ENST00000454489 AEBP2Q6ZN18 517 aaPredicted RBP11.13□□□□□ -0.63
AC099344.3-201ENST00000454489 SLC24A1O60721 1099 aa11.06□□□□□ -0.64
AC099344.3-201ENST00000454489 CHIC1Q5VXU3 224 aa10.82□□□□□ -0.68
AC099344.3-201ENST00000454489 CCDC180Q9P1Z9 1646 aa10.58□□□□□ -0.72
AC099344.3-201ENST00000454489 MYT1Q01538 1121 aa10.46□□□□□ -0.73
AC099344.3-201ENST00000454489 TTBK1Q5TCY1 1321 aaPredicted RBP10.43□□□□□ -0.74
AC099344.3-201ENST00000454489 DAXXQ9UER7 740 aaPredicted RBP10.29□□□□□ -0.76
AC099344.3-201ENST00000454489 ZCCHC6Q5VYS8 1495 aaKnown RBP10.28□□□□□ -0.76
AC099344.3-201ENST00000454489 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
AC099344.3-201ENST00000454489 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
AC099344.3-201ENST00000454489 DCAF1Q9Y4B6 1507 aa10.14□□□□□ -0.79
AC099344.3-201ENST00000454489 ABCC9O60706 1549 aa10.05□□□□□ -0.8
AC099344.3-201ENST00000454489 APLP2Q06481 763 aa10.04□□□□□ -0.8
AC099344.3-201ENST00000454489 SHROOM4Q9ULL8 1493 aa10.04□□□□□ -0.8
AC099344.3-201ENST00000454489 MYO15BQ96JP2 1530 aa10.02□□□□□ -0.8
AC099344.3-201ENST00000454489 NCBP3Q53F19 620 aaKnown RBP9.95□□□□□ -0.82
AC099344.3-201ENST00000454489 ERICH6Q7L0X2 663 aa9.95□□□□□ -0.82
AC099344.3-201ENST00000454489 NACADO15069 1562 aa9.93□□□□□ -0.82
AC099344.3-201ENST00000454489 PRKCSHP14314 528 aaPredicted RBP9.87□□□□□ -0.83
AC099344.3-201ENST00000454489 RB1CC1Q8TDY2 1594 aa9.82□□□□□ -0.84
AC099344.3-201ENST00000454489 SCRIBQ14160 1630 aa9.75□□□□□ -0.85
AC099344.3-201ENST00000454489 SUPT5HO00267 1087 aaKnown RBP9.73□□□□□ -0.85
AC099344.3-201ENST00000454489 EHMT2Q96KQ7 1210 aa9.73□□□□□ -0.85
AC099344.3-201ENST00000454489 ARXQ96QS3 562 aa9.67□□□□□ -0.86
AC099344.3-201ENST00000454489 RTN4Q9NQC3 1192 aaKnown RBP9.67□□□□□ -0.86
AC099344.3-201ENST00000454489 AMER1Q5JTC6 1135 aaPredicted RBP9.62□□□□□ -0.87
AC099344.3-201ENST00000454489 PLPPR3Q6T4P5 718 aa9.61□□□□□ -0.87
AC099344.3-201ENST00000454489 PHF23Q9BUL5 403 aaPredicted RBP9.6□□□□□ -0.87
AC099344.3-201ENST00000454489 PABPN1Q86U42 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
AC099344.3-201ENST00000454489 RSF1Q96T23 1441 aaPredicted RBP9.55□□□□□ -0.88
AC099344.3-201ENST00000454489 CECR2Q9BXF3 1484 aa9.51□□□□□ -0.89
AC099344.3-201ENST00000454489 BICRAQ9NZM4 1560 aa9.48□□□□□ -0.89
AC099344.3-201ENST00000454489 UNC13AQ9UPW8 1703 aa9.46□□□□□ -0.89
AC099344.3-201ENST00000454489 BAZ1AQ9NRL2 1556 aaPredicted RBP9.46□□□□□ -0.9
AC099344.3-201ENST00000454489 MROH2BQ7Z745 1585 aa9.45□□□□□ -0.9
AC099344.3-201ENST00000454489 RANGAP1P46060 587 aaPredicted RBP9.37□□□□□ -0.91
AC099344.3-201ENST00000454489 SMARCA4P51532 1647 aa9.36□□□□□ -0.91
AC099344.3-201ENST00000454489 SENP3Q9H4L4 574 aaPredicted RBP9.33□□□□□ -0.92
AC099344.3-201ENST00000454489 WIZO95785 1651 aa9.32□□□□□ -0.92
AC099344.3-201ENST00000454489 EIF5BO60841 1220 aaKnown RBP9.3□□□□□ -0.92
AC099344.3-201ENST00000454489 TIMELESSQ9UNS1 1208 aa9.29□□□□□ -0.92
AC099344.3-201ENST00000454489 HOMEZQ8IX15 550 aa9.28□□□□□ -0.92
AC099344.3-201ENST00000454489 TOP2AP11388 1531 aaKnown RBP9.27□□□□□ -0.93
AC099344.3-201ENST00000454489 ATAD2BQ9ULI0 1458 aa9.27□□□□□ -0.93
AC099344.3-201ENST00000454489 PEG3Q9GZU2 1588 aa9.26□□□□□ -0.93
AC099344.3-201ENST00000454489 SMARCA2P51531 1590 aa9.25□□□□□ -0.93
AC099344.3-201ENST00000454489 KCNA4P22459 653 aa9.24□□□□□ -0.93
AC099344.3-201ENST00000454489 CCDC88BA6NC98 1476 aa9.21□□□□□ -0.93
AC099344.3-201ENST00000454489 EIF4G1Q04637 1599 aaKnown RBP9.21□□□□□ -0.93
AC099344.3-201ENST00000454489 NCAPD3P42695 1498 aa9.21□□□□□ -0.94
AC099344.3-201ENST00000454489 BAZ1BQ9UIG0 1483 aaKnown RBP9.21□□□□□ -0.94
AC099344.3-201ENST00000454489 TRIM41Q8WV44 630 aa9.18□□□□□ -0.94
AC099344.3-201ENST00000454489 CSRNP3Q8WYN3 585 aa9.15□□□□□ -0.94
AC099344.3-201ENST00000454489 TAOK2Q9UL54 1235 aa9.14□□□□□ -0.95
AC099344.3-201ENST00000454489 HMGXB3Q12766 1538 aa9.14□□□□□ -0.95
AC099344.3-201ENST00000454489 TULP1O00294 542 aaPredicted RBP9.12□□□□□ -0.95
AC099344.3-201ENST00000454489 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
AC099344.3-201ENST00000454489 CC2D2AQ9P2K1 1620 aa9.05□□□□□ -0.96
AC099344.3-201ENST00000454489 BCANQ96GW7 911 aa9.05□□□□□ -0.96
AC099344.3-201ENST00000454489 CFTRP13569 1480 aa9□□□□□ -0.97
AC099344.3-201ENST00000454489 CADPSQ9ULU8 1353 aa8.99□□□□□ -0.97
AC099344.3-201ENST00000454489 WRNQ14191 1432 aaPredicted RBP eCLIP8.99□□□□□ -0.97
AC099344.3-201ENST00000454489 FAM9AQ8IZU1 332 aaPredicted RBP8.98□□□□□ -0.97
AC099344.3-201ENST00000454489 PODXL2Q9NZ53 605 aa8.98□□□□□ -0.97
AC099344.3-201ENST00000454489 LOC105371045A0A1W2PR82 267 aa8.97□□□□□ -0.97
AC099344.3-201ENST00000454489 ABCC8Q09428 1581 aa8.96□□□□□ -0.97
AC099344.3-201ENST00000454489 BCL11AQ9H165 835 aa8.96□□□□□ -0.98
AC099344.3-201ENST00000454489 GTF3C3Q9Y5Q9 886 aa8.93□□□□□ -0.98
AC099344.3-201ENST00000454489 EEA1Q15075 1411 aa8.91□□□□□ -0.98
AC099344.3-201ENST00000454489 TPRNQ4KMQ1 711 aa8.91□□□□□ -0.98
AC099344.3-201ENST00000454489 FBXO3Q9UK99 471 aa8.91□□□□□ -0.98
AC099344.3-201ENST00000454489 SOGA1O94964 1423 aa8.88□□□□□ -0.99
AC099344.3-201ENST00000454489 DNAJC5BQ9UF47 199 aa8.87□□□□□ -0.99
AC099344.3-201ENST00000454489 SYNJ1O43426 1573 aa8.86□□□□□ -0.99
AC099344.3-201ENST00000454489 NPM2Q86SE8 214 aaKnown RBP8.86□□□□□ -0.99
AC099344.3-201ENST00000454489 TOP2BQ02880 1626 aa8.85□□□□□ -0.99
AC099344.3-201ENST00000454489 FANCD2Q9BXW9 1451 aa8.84□□□□□ -0.99
AC099344.3-201ENST00000454489 PDS5BQ9NTI5 1447 aa8.84□□□□□ -0.99
AC099344.3-201ENST00000454489 CUX1P39880 1505 aa8.83□□□□□ -1
AC099344.3-201ENST00000454489 LAMC3Q9Y6N6 1575 aa8.82□□□□□ -1
AC099344.3-201ENST00000454489 PLEKHG5O94827 1062 aa8.82□□□□□ -1
AC099344.3-201ENST00000454489 NESP48681 1621 aa8.81□□□□□ -1
AC099344.3-201ENST00000454489 RUSC2Q8N2Y8 1516 aa8.8□□□□□ -1
AC099344.3-201ENST00000454489 BIVM-ERCC5R4GMW8 1640 aa8.8□□□□□ -1
AC099344.3-201ENST00000454489 UBTFP17480 764 aaKnown RBP8.79□□□□□ -1
AC099344.3-201ENST00000454489 PLCB2Q00722 1185 aa8.79□□□□□ -1
AC099344.3-201ENST00000454489 CEP164Q9UPV0 1460 aa8.78□□□□□ -1
AC099344.3-201ENST00000454489 KIF27Q86VH2 1401 aa8.78□□□□□ -1
AC099344.3-201ENST00000454489 PRDM2Q13029 1718 aa8.77□□□□□ -1
AC099344.3-201ENST00000454489 TNIKQ9UKE5 1360 aa8.77□□□□□ -1.01
AC099344.3-201ENST00000454489 GOLGA3Q08378 1498 aa8.76□□□□□ -1.01
AC099344.3-201ENST00000454489 FGD5Q6ZNL6 1462 aa8.74□□□□□ -1.01
AC099344.3-201ENST00000454489 TOPBP1Q92547 1522 aa8.74□□□□□ -1.01
AC099344.3-201ENST00000454489 DNMBPQ6XZF7 1577 aa8.73□□□□□ -1.01
AC099344.3-201ENST00000454489 FOXD1Q16676 465 aa8.73□□□□□ -1.01
AC099344.3-201ENST00000454489 CUX2O14529 1486 aa8.72□□□□□ -1.01
AC099344.3-201ENST00000454489 IGF1RP08069 1367 aa8.72□□□□□ -1.01
AC099344.3-201ENST00000454489 TMEM132AQ24JP5 1023 aa8.71□□□□□ -1.02
AC099344.3-201ENST00000454489 PRXQ9BXM0 1461 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms