RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 NISCHQ9Y2I1 1504 aa12.6□□□□□ -0.39
SOX6-201ENST00000316399 DCAF8L2P0C7V8 631 aa11.81□□□□□ -0.52
SOX6-201ENST00000316399 SUPT5HO00267 1087 aaKnown RBP11.55□□□□□ -0.56
SOX6-201ENST00000316399 PELP1Q8IZL8 1130 aaKnown RBP11.5□□□□□ -0.57
SOX6-201ENST00000316399 ZEB1P37275 1124 aaPredicted RBP11.32□□□□□ -0.6
SOX6-201ENST00000316399 SHROOM4Q9ULL8 1493 aa11.31□□□□□ -0.6
SOX6-201ENST00000316399 APLP2Q06481 763 aa11.22□□□□□ -0.61
SOX6-201ENST00000316399 MYT1Q01538 1121 aa11.1□□□□□ -0.63
SOX6-201ENST00000316399 FAM9AQ8IZU1 332 aaPredicted RBP11.08□□□□□ -0.64
SOX6-201ENST00000316399 CENPBP07199 599 aaPredicted RBP11.07□□□□□ -0.64
SOX6-201ENST00000316399 TRIM41Q8WV44 630 aa10.96□□□□□ -0.66
SOX6-201ENST00000316399 PCGF6Q9BYE7 350 aa10.92□□□□□ -0.66
SOX6-201ENST00000316399 CCER1Q8TC90 406 aaPredicted RBP10.91□□□□□ -0.66
SOX6-201ENST00000316399 TRIM26Q12899 539 aaPredicted RBP10.81□□□□□ -0.68
SOX6-201ENST00000316399 HRCP23327 699 aa10.74□□□□□ -0.69
SOX6-201ENST00000316399 NEFLP07196 543 aa10.69□□□□□ -0.7
SOX6-201ENST00000316399 UBTFP17480 764 aaKnown RBP10.68□□□□□ -0.7
SOX6-201ENST00000316399 CCDC180Q9P1Z9 1646 aa10.67□□□□□ -0.7
SOX6-201ENST00000316399 CHIC1Q5VXU3 224 aa10.67□□□□□ -0.7
SOX6-201ENST00000316399 EHMT2Q96KQ7 1210 aa10.62□□□□□ -0.71
SOX6-201ENST00000316399 ERICH6Q7L0X2 663 aa10.61□□□□□ -0.71
SOX6-201ENST00000316399 ZCCHC6Q5VYS8 1495 aaKnown RBP10.57□□□□□ -0.72
SOX6-201ENST00000316399 CLSPNQ9HAW4 1339 aa10.47□□□□□ -0.73
SOX6-201ENST00000316399 DCAF1Q9Y4B6 1507 aa10.46□□□□□ -0.74
SOX6-201ENST00000316399 TTBK1Q5TCY1 1321 aaPredicted RBP10.4□□□□□ -0.74
SOX6-201ENST00000316399 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
SOX6-201ENST00000316399 ATP1B4Q9UN42 357 aaPredicted RBP10.31□□□□□ -0.76
SOX6-201ENST00000316399 RANGAP1P46060 587 aaPredicted RBP10.31□□□□□ -0.76
SOX6-201ENST00000316399 EEA1Q15075 1411 aa10.29□□□□□ -0.76
SOX6-201ENST00000316399 DIEXFQ68CQ4 756 aaKnown RBP10.28□□□□□ -0.76
SOX6-201ENST00000316399 DAXXQ9UER7 740 aaPredicted RBP10.26□□□□□ -0.77
SOX6-201ENST00000316399 ACIN1Q9UKV3 1341 aaKnown RBP10.25□□□□□ -0.77
SOX6-201ENST00000316399 LOC105371045A0A1W2PR82 267 aa10.23□□□□□ -0.77
SOX6-201ENST00000316399 ABCC9O60706 1549 aa10.21□□□□□ -0.78
SOX6-201ENST00000316399 NACADO15069 1562 aa10.17□□□□□ -0.78
SOX6-201ENST00000316399 HNRNPUL2Q1KMD3 747 aaKnown RBP10.17□□□□□ -0.78
SOX6-201ENST00000316399 CSRNP3Q8WYN3 585 aa10.17□□□□□ -0.78
SOX6-201ENST00000316399 ZNF316A6NFI3 1004 aaPredicted RBP10.15□□□□□ -0.78
SOX6-201ENST00000316399 RTL5Q5HYW3 569 aaPredicted RBP10.15□□□□□ -0.78
SOX6-201ENST00000316399 RB1CC1Q8TDY2 1594 aa10.14□□□□□ -0.79
SOX6-201ENST00000316399 SCRIBQ14160 1630 aa10.13□□□□□ -0.79
SOX6-201ENST00000316399 MYT1LQ9UL68 1186 aa10.13□□□□□ -0.79
SOX6-201ENST00000316399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
SOX6-201ENST00000316399 ANP32CO43423 234 aa10.1□□□□□ -0.79
SOX6-201ENST00000316399 MYO15BQ96JP2 1530 aa10.09□□□□□ -0.79
SOX6-201ENST00000316399 PPARGC1BQ86YN6 1023 aaKnown RBP10.08□□□□□ -0.8
SOX6-201ENST00000316399 ITGAEP38570 1179 aa10.06□□□□□ -0.8
SOX6-201ENST00000316399 CDK11AQ9UQ88 783 aaPredicted RBP10.05□□□□□ -0.8
SOX6-201ENST00000316399 GOLGA3Q08378 1498 aa10.03□□□□□ -0.8
SOX6-201ENST00000316399 FAM50AQ14320 339 aaKnown RBP10.03□□□□□ -0.8
SOX6-201ENST00000316399 BAZ1AQ9NRL2 1556 aaPredicted RBP10.02□□□□□ -0.81
SOX6-201ENST00000316399 RSF1Q96T23 1441 aaPredicted RBP10□□□□□ -0.81
SOX6-201ENST00000316399 CLIP1P30622 1438 aa9.99□□□□□ -0.81
SOX6-201ENST00000316399 GTF3C3Q9Y5Q9 886 aa9.98□□□□□ -0.81
SOX6-201ENST00000316399 CEP164Q9UPV0 1460 aa9.98□□□□□ -0.81
SOX6-201ENST00000316399 TNIKQ9UKE5 1360 aa9.96□□□□□ -0.82
SOX6-201ENST00000316399 TRIM52Q96A61 297 aa9.95□□□□□ -0.82
SOX6-201ENST00000316399 TONSLQ96HA7 1378 aa9.95□□□□□ -0.82
SOX6-201ENST00000316399 CEP162Q5TB80 1403 aa9.91□□□□□ -0.82
SOX6-201ENST00000316399 WRNQ14191 1432 aaPredicted RBP eCLIP9.91□□□□□ -0.82
SOX6-201ENST00000316399 POLR3GLQ9BT43 218 aa9.9□□□□□ -0.82
SOX6-201ENST00000316399 PABPN1Q86U42 306 aaKnown RBP eCLIP9.9□□□□□ -0.83
SOX6-201ENST00000316399 ANP32AP39687 249 aaKnown RBP9.89□□□□□ -0.83
SOX6-201ENST00000316399 KIF27Q86VH2 1401 aa9.87□□□□□ -0.83
SOX6-201ENST00000316399 BAZ1BQ9UIG0 1483 aaKnown RBP9.86□□□□□ -0.83
SOX6-201ENST00000316399 TIMELESSQ9UNS1 1208 aa9.85□□□□□ -0.83
SOX6-201ENST00000316399 NEUROD1Q13562 356 aa9.85□□□□□ -0.83
SOX6-201ENST00000316399 NEFMP07197 916 aa9.83□□□□□ -0.84
SOX6-201ENST00000316399 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
SOX6-201ENST00000316399 FHAD1B1AJZ9 1412 aa9.83□□□□□ -0.84
SOX6-201ENST00000316399 MTUS2Q5JR59 1369 aa9.8□□□□□ -0.84
SOX6-201ENST00000316399 SMARCA2P51531 1590 aa9.79□□□□□ -0.84
SOX6-201ENST00000316399 CANXP27824 592 aaKnown RBP9.77□□□□□ -0.85
SOX6-201ENST00000316399 EIF5BO60841 1220 aaKnown RBP9.76□□□□□ -0.85
SOX6-201ENST00000316399 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.75□□□□□ -0.85
SOX6-201ENST00000316399 UPF2Q9HAU5 1272 aaKnown RBP9.75□□□□□ -0.85
SOX6-201ENST00000316399 VPS8Q8N3P4 1428 aa9.74□□□□□ -0.85
SOX6-201ENST00000316399 ZNF326Q5BKZ1 582 aaKnown RBP9.74□□□□□ -0.85
SOX6-201ENST00000316399 TOP2AP11388 1531 aaKnown RBP9.73□□□□□ -0.85
SOX6-201ENST00000316399 ANP32BQ92688 251 aaKnown RBP9.7□□□□□ -0.86
SOX6-201ENST00000316399 ANP32EQ9BTT0 268 aa9.7□□□□□ -0.86
SOX6-201ENST00000316399 SLC24A1O60721 1099 aa9.7□□□□□ -0.86
SOX6-201ENST00000316399 SLC4A1APQ9BWU0 796 aaKnown RBP9.7□□□□□ -0.86
SOX6-201ENST00000316399 BCANQ96GW7 911 aa9.68□□□□□ -0.86
SOX6-201ENST00000316399 CDCA8Q53HL2 280 aa9.68□□□□□ -0.86
SOX6-201ENST00000316399 EIF4G2P78344 907 aaKnown RBP eCLIP9.68□□□□□ -0.86
SOX6-201ENST00000316399 ERICH6BQ5W0A0 696 aa9.67□□□□□ -0.86
SOX6-201ENST00000316399 HNRNPUQ00839 825 aaKnown RBP eCLIP9.67□□□□□ -0.86
SOX6-201ENST00000316399 TSPY4P0CV99 314 aa9.66□□□□□ -0.86
SOX6-201ENST00000316399 TSPY10P0CW01 314 aa9.66□□□□□ -0.86
SOX6-201ENST00000316399 CCNB3Q8WWL7 1395 aa9.66□□□□□ -0.86
SOX6-201ENST00000316399 ARID4BQ4LE39 1312 aaPredicted RBP9.65□□□□□ -0.86
SOX6-201ENST00000316399 FKBP8Q14318 412 aa9.65□□□□□ -0.86
SOX6-201ENST00000316399 DDRGK1Q96HY6 314 aa9.64□□□□□ -0.87
SOX6-201ENST00000316399 GLIPR1L2Q4G1C9 344 aa9.64□□□□□ -0.87
SOX6-201ENST00000316399 FMN1Q68DA7 1419 aa9.63□□□□□ -0.87
SOX6-201ENST00000316399 CCER2I3L3R5 266 aa9.62□□□□□ -0.87
SOX6-201ENST00000316399 MRS2Q9HD23 443 aa9.62□□□□□ -0.87
SOX6-201ENST00000316399 CCDC136Q96JN2 1154 aa9.62□□□□□ -0.87
SOX6-201ENST00000316399 ARHGAP35Q9NRY4 1499 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms