Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 OR4G11P-202ENST00000642116 1414 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AL049634.1-201ENST00000453770 1720 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AP003175.1-201ENST00000641383 6658 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 PPIAP30-201ENST00000415473 519 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AL953862.1-201ENST00000423016 168 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 CHCHD3P1-201ENST00000425516 676 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 PCBP2P1-201ENST00000437262 977 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 MTND6P13-201ENST00000443510 523 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 MTCO3P20-201ENST00000454926 688 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AL445187.1-201ENST00000502685 260 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 RNU6-1045P-201ENST00000516321 107 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 RNU6-1261P-201ENST00000517194 104 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC024614.1-201ENST00000577546 307 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 Z98200.1-201ENST00000607298 470 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AL049541.2-201ENST00000626377 555 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC026108.1-201ENST00000635444 547 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AL391380.1-201ENST00000439300 1432 ntBASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHB11Q9Y5F2 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC021242.1-201ENST00000507315 2035 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 SYF2-202ENST00000354361 926 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 Y_RNA.72-201ENST00000362894 103 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 RNU6-666P-201ENST00000363499 107 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 RNU1-16P-201ENST00000365477 164 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 MIR555-201ENST00000384987 96 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms