RNA–Protein interactions for RNA: ENST00000532530.1

AP003498.1-201, humanhuman

TSL 3 BASIC

Gene AP003498.1, Length 347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003498.1-201ENST00000532530 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
AP003498.1-201ENST00000532530 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
AP003498.1-201ENST00000532530 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
AP003498.1-201ENST00000532530 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
AP003498.1-201ENST00000532530 FOXD1Q16676 465 aa17.89■□□□□ 0.45
AP003498.1-201ENST00000532530 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
AP003498.1-201ENST00000532530 MSH5O43196 834 aa16.78■□□□□ 0.28
AP003498.1-201ENST00000532530 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
AP003498.1-201ENST00000532530 ADRA2BP18089 450 aa16.71■□□□□ 0.27
AP003498.1-201ENST00000532530 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
AP003498.1-201ENST00000532530 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
AP003498.1-201ENST00000532530 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
AP003498.1-201ENST00000532530 MAPK8IP2Q13387 824 aaPredicted RBP15.32■□□□□ 0.04
AP003498.1-201ENST00000532530 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
AP003498.1-201ENST00000532530 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
AP003498.1-201ENST00000532530 CNKSR2Q8WXI2 1034 aa14.76□□□□□ -0.05
AP003498.1-201ENST00000532530 DCAF8L1A6NGE4 600 aa14.72□□□□□ -0.05
AP003498.1-201ENST00000532530 HOXD11P31277 338 aaPredicted RBP14.67□□□□□ -0.06
AP003498.1-201ENST00000532530 RNF216Q9NWF9 866 aaPredicted RBP14.59□□□□□ -0.07
AP003498.1-201ENST00000532530 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.09
AP003498.1-201ENST00000532530 CACNB1Q02641 598 aaPredicted RBP14.42□□□□□ -0.1
AP003498.1-201ENST00000532530 RNF39Q9H2S5 420 aa14.27□□□□□ -0.13
AP003498.1-201ENST00000532530 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
AP003498.1-201ENST00000532530 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
AP003498.1-201ENST00000532530 C1QBPQ07021 282 aaKnown RBP14.1□□□□□ -0.15
AP003498.1-201ENST00000532530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.16
AP003498.1-201ENST00000532530 KCNA4P22459 653 aa13.98□□□□□ -0.17
AP003498.1-201ENST00000532530 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
AP003498.1-201ENST00000532530 CAPN15O75808 1086 aa13.55□□□□□ -0.24
AP003498.1-201ENST00000532530 SLC4A2P04920 1241 aa13.55□□□□□ -0.24
AP003498.1-201ENST00000532530 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
AP003498.1-201ENST00000532530 APLP2Q06481 763 aa13.43□□□□□ -0.26
AP003498.1-201ENST00000532530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
AP003498.1-201ENST00000532530 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
AP003498.1-201ENST00000532530 DSG3P32926 999 aa13.39□□□□□ -0.27
AP003498.1-201ENST00000532530 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
AP003498.1-201ENST00000532530 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
AP003498.1-201ENST00000532530 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
AP003498.1-201ENST00000532530 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
AP003498.1-201ENST00000532530 ABCB7O75027 752 aa13.21□□□□□ -0.29
AP003498.1-201ENST00000532530 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
AP003498.1-201ENST00000532530 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
AP003498.1-201ENST00000532530 POLA2Q14181 598 aa12.95□□□□□ -0.34
AP003498.1-201ENST00000532530 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
AP003498.1-201ENST00000532530 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
AP003498.1-201ENST00000532530 ZBTB22O15209 634 aa12.8□□□□□ -0.36
AP003498.1-201ENST00000532530 POTEHQ6S545 545 aa12.8□□□□□ -0.36
AP003498.1-201ENST00000532530 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
AP003498.1-201ENST00000532530 ATXN8OSP0DMR3 200 aa12.66□□□□□ -0.38
AP003498.1-201ENST00000532530 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
AP003498.1-201ENST00000532530 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
AP003498.1-201ENST00000532530 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
AP003498.1-201ENST00000532530 FBLN2P98095 1184 aa12.44□□□□□ -0.42
AP003498.1-201ENST00000532530 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
AP003498.1-201ENST00000532530 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
AP003498.1-201ENST00000532530 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
AP003498.1-201ENST00000532530 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
AP003498.1-201ENST00000532530 CSRNP3Q8WYN3 585 aa12.27□□□□□ -0.45
AP003498.1-201ENST00000532530 PITPNM1O00562 1244 aa12.25□□□□□ -0.45
AP003498.1-201ENST00000532530 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
AP003498.1-201ENST00000532530 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
AP003498.1-201ENST00000532530 EHMT2Q96KQ7 1210 aa12.19□□□□□ -0.46
AP003498.1-201ENST00000532530 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
AP003498.1-201ENST00000532530 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
AP003498.1-201ENST00000532530 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
AP003498.1-201ENST00000532530 SPDYE1Q8NFV5 336 aaPredicted RBP12.1□□□□□ -0.47
AP003498.1-201ENST00000532530 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
AP003498.1-201ENST00000532530 HAX1O00165 279 aa12.04□□□□□ -0.48
AP003498.1-201ENST00000532530 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
AP003498.1-201ENST00000532530 PABPN1Q86U42 306 aaKnown RBP eCLIP11.99□□□□□ -0.49
AP003498.1-201ENST00000532530 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
AP003498.1-201ENST00000532530 PRR29P0C7W0 189 aa11.9□□□□□ -0.5
AP003498.1-201ENST00000532530 CHADLQ6NUI6 762 aa11.83□□□□□ -0.52
AP003498.1-201ENST00000532530 EVX2Q03828 476 aa11.79□□□□□ -0.52
AP003498.1-201ENST00000532530 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
AP003498.1-201ENST00000532530 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
AP003498.1-201ENST00000532530 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
AP003498.1-201ENST00000532530 FARP1Q9Y4F1 1045 aaPredicted RBP11.64□□□□□ -0.55
AP003498.1-201ENST00000532530 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
AP003498.1-201ENST00000532530 GABBR2O75899 941 aa11.57□□□□□ -0.56
AP003498.1-201ENST00000532530 CREBZFQ9NS37 354 aa11.54□□□□□ -0.56
AP003498.1-201ENST00000532530 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
AP003498.1-201ENST00000532530 CLCN6P51797 869 aa11.44□□□□□ -0.58
AP003498.1-201ENST00000532530 PAK3O75914 559 aaPredicted RBP11.42□□□□□ -0.58
AP003498.1-201ENST00000532530 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
AP003498.1-201ENST00000532530 ZNF579Q8NAF0 562 aaKnown RBP11.39□□□□□ -0.59
AP003498.1-201ENST00000532530 PROM2Q8N271 834 aa11.37□□□□□ -0.59
AP003498.1-201ENST00000532530 DCBLD2Q96PD2 775 aa11.34□□□□□ -0.59
AP003498.1-201ENST00000532530 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
AP003498.1-201ENST00000532530 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
AP003498.1-201ENST00000532530 POTEIP0CG38 1075 aa11.28□□□□□ -0.6
AP003498.1-201ENST00000532530 LHX8Q68G74 356 aa11.28□□□□□ -0.6
AP003498.1-201ENST00000532530 PHF12Q96QT6 1004 aa11.26□□□□□ -0.61
AP003498.1-201ENST00000532530 GALR2O43603 387 aaPredicted RBP11.24□□□□□ -0.61
AP003498.1-201ENST00000532530 MIER1Q8N108 512 aa11.23□□□□□ -0.61
AP003498.1-201ENST00000532530 FKBP8Q14318 412 aa11.2□□□□□ -0.62
AP003498.1-201ENST00000532530 TSPYL2Q9H2G4 693 aaPredicted RBP11.2□□□□□ -0.62
AP003498.1-201ENST00000532530 PLCD3Q8N3E9 789 aa11.17□□□□□ -0.62
AP003498.1-201ENST00000532530 MS4A3Q96HJ5 214 aa11.11□□□□□ -0.63
AP003498.1-201ENST00000532530 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms