Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC092162.3-201ENST00000624511 1624 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC007823.1-201ENST00000569932 1566 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 OR4G11P-202ENST00000642116 1414 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 RPL11P4-201ENST00000332269 436 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 RNA5SP483-201ENST00000363431 118 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AL139327.1-201ENST00000382988 348 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 RNU6-1122P-201ENST00000384449 107 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 RNU6-1160P-201ENST00000384546 104 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 MIR181C-201ENST00000384881 110 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC104297.1-201ENST00000393779 870 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 RN7SKP207-201ENST00000411204 303 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AL773545.3-201ENST00000414297 706 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 USP9YP13-201ENST00000417797 480 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 MED15P9-201ENST00000424716 533 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC099344.1-201ENST00000433548 492 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AL022238.1-201ENST00000442557 355 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC010240.2-201ENST00000445363 1205 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 RPS4XP12-201ENST00000461747 709 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 RPL30P9-201ENST00000465586 330 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AP000797.1-201ENST00000478870 387 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC008629.2-201ENST00000503783 483 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC105914.1-201ENST00000511798 226 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 ARL2BPP5-201ENST00000523141 481 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 HSPA8P13-201ENST00000523715 472 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AL512310.1-201ENST00000548639 172 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 NUTF2P2-201ENST00000551207 384 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC092133.1-201ENST00000565828 719 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 RN7SL689P-201ENST00000577215 297 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC090415.1-201ENST00000581877 847 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 VN1R80P-201ENST00000597126 338 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC007262.1-201ENST00000604099 321 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AP003068.4-201ENST00000623192 802 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC021106.3-201ENST00000623925 531 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC079228.1-201ENST00000624774 1049 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AL096816.1-201ENST00000623300 2920 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 AL359396.1-201ENST00000623151 2376 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 THAP12P7-201ENST00000520248 2290 ntBASIC7.38□□□□□ -1.23
CUEDC1Q9NWM3 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 HDAC1P1-201ENST00000455482 1445 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 RNA5SP27-201ENST00000363839 119 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 RNU6-374P-201ENST00000364146 108 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 RNU1-16P-201ENST00000365477 164 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 MIR555-201ENST00000384987 96 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 HMGB3P1-201ENST00000393368 573 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC092952.1-201ENST00000397646 1209 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AL136131.1-201ENST00000406079 803 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 RPSAP44-201ENST00000406712 884 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC010385.1-201ENST00000412374 256 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms