Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AC243312.2-201ENST00000623340 601 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 AL049541.2-201ENST00000626377 555 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 MFF-206ENST00000392059 1710 ntTSL 5 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 AL136140.2-201ENST00000624717 1705 ntBASIC8.57□□□□□ -1.04
VARS2Q5ST30 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
VARS2Q5ST30 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
VARS2Q5ST30 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC096992.2-201ENST00000609553 1684 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 RNU6-740P-201ENST00000364734 105 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 AMELY-202ENST00000383036 621 ntTSL 5 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC245036.1-201ENST00000391727 309 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 RPL31P52-201ENST00000407532 367 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 GEMIN2P2-201ENST00000418195 715 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 IGKV1OR9-1-201ENST00000424370 284 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 PRPF38AP2-201ENST00000438179 851 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC073109.1-201ENST00000445066 978 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 Y_RNA.653-201ENST00000459091 95 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 NDUFB4P1-201ENST00000462398 381 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC090589.1-201ENST00000473109 362 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 RPL7L1P13-201ENST00000511702 739 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 CKS1BP3-201ENST00000600888 237 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 ERG-206ENST00000398911 4914 ntTSL 5 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 AL049641.1-201ENST00000441055 1948 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 ABCA17P-204ENST00000494925 3478 ntBASIC8.56□□□□□ -1.04
VARS2Q5ST30 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
VARS2Q5ST30 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
VARS2Q5ST30 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 ATP13A4-201ENST00000295548 2157 ntTSL 5 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VARS2Q5ST30 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 RNU6-462P-201ENST00000362659 105 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 Y_RNA.80-201ENST00000362996 102 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 RNU6-266P-201ENST00000364225 107 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 RNU6-31P-201ENST00000384388 108 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 PHBP1-201ENST00000392260 808 ntBASIC8.55□□□□□ -1.04
VARS2Q5ST30 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
VARS2Q5ST30 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms