RNA–Protein interactions for RNA: ENST00000581852.5

CCDC178-211, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC178, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-211ENST00000581852 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
CCDC178-211ENST00000581852 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
CCDC178-211ENST00000581852 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
CCDC178-211ENST00000581852 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
CCDC178-211ENST00000581852 FOXD1Q16676 465 aa15.22■□□□□ 0.03
CCDC178-211ENST00000581852 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
CCDC178-211ENST00000581852 POTEDQ86YR6 584 aa14.61□□□□□ -0.07
CCDC178-211ENST00000581852 ADRA2BP18089 450 aa14.45□□□□□ -0.1
CCDC178-211ENST00000581852 PPP6R1Q9UPN7 881 aa14.44□□□□□ -0.1
CCDC178-211ENST00000581852 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
CCDC178-211ENST00000581852 MSH5O43196 834 aa14.19□□□□□ -0.14
CCDC178-211ENST00000581852 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
CCDC178-211ENST00000581852 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
CCDC178-211ENST00000581852 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
CCDC178-211ENST00000581852 DMRT2Q9Y5R5 561 aa13.04□□□□□ -0.32
CCDC178-211ENST00000581852 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
CCDC178-211ENST00000581852 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
CCDC178-211ENST00000581852 RNF216Q9NWF9 866 aaPredicted RBP12.68□□□□□ -0.38
CCDC178-211ENST00000581852 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
CCDC178-211ENST00000581852 KCNA4P22459 653 aa12.6□□□□□ -0.39
CCDC178-211ENST00000581852 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
CCDC178-211ENST00000581852 NPM3O75607 178 aaKnown RBP12.57□□□□□ -0.4
CCDC178-211ENST00000581852 CACNB1Q02641 598 aaPredicted RBP12.41□□□□□ -0.42
CCDC178-211ENST00000581852 DNAJC5BQ9UF47 199 aa12.2□□□□□ -0.46
CCDC178-211ENST00000581852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
CCDC178-211ENST00000581852 RNF39Q9H2S5 420 aa12.08□□□□□ -0.48
CCDC178-211ENST00000581852 SLC4A1APQ9BWU0 796 aaKnown RBP12□□□□□ -0.49
CCDC178-211ENST00000581852 C1QBPQ07021 282 aaKnown RBP11.97□□□□□ -0.49
CCDC178-211ENST00000581852 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
CCDC178-211ENST00000581852 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
CCDC178-211ENST00000581852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.53
CCDC178-211ENST00000581852 HNRNPUL2Q1KMD3 747 aaKnown RBP11.71□□□□□ -0.53
CCDC178-211ENST00000581852 FOXD4L1Q9NU39 408 aa11.69□□□□□ -0.54
CCDC178-211ENST00000581852 APLP2Q06481 763 aa11.67□□□□□ -0.54
CCDC178-211ENST00000581852 MYCNP04198 464 aaPredicted RBP11.66□□□□□ -0.54
CCDC178-211ENST00000581852 SAMD1Q6SPF0 538 aaPredicted RBP11.64□□□□□ -0.55
CCDC178-211ENST00000581852 CAPN15O75808 1086 aa11.63□□□□□ -0.55
CCDC178-211ENST00000581852 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
CCDC178-211ENST00000581852 ZBTB22O15209 634 aa11.54□□□□□ -0.56
CCDC178-211ENST00000581852 TRHP20396 242 aaPredicted RBP11.51□□□□□ -0.57
CCDC178-211ENST00000581852 ZNF219Q9P2Y4 722 aaPredicted RBP11.5□□□□□ -0.57
CCDC178-211ENST00000581852 DSG3P32926 999 aa11.43□□□□□ -0.58
CCDC178-211ENST00000581852 EHMT2Q96KQ7 1210 aa11.39□□□□□ -0.59
CCDC178-211ENST00000581852 ABCB7O75027 752 aa11.36□□□□□ -0.59
CCDC178-211ENST00000581852 POTEHQ6S545 545 aa11.34□□□□□ -0.59
CCDC178-211ENST00000581852 CSRNP3Q8WYN3 585 aa11.32□□□□□ -0.6
CCDC178-211ENST00000581852 ATXN8OSP0DMR3 200 aa11.31□□□□□ -0.6
CCDC178-211ENST00000581852 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
CCDC178-211ENST00000581852 POLA2Q14181 598 aa11.25□□□□□ -0.61
CCDC178-211ENST00000581852 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
CCDC178-211ENST00000581852 FBLN2P98095 1184 aa10.96□□□□□ -0.65
CCDC178-211ENST00000581852 RBM42Q9BTD8 480 aaKnown RBP10.95□□□□□ -0.66
CCDC178-211ENST00000581852 OSCARQ8IYS5 282 aa10.85□□□□□ -0.67
CCDC178-211ENST00000581852 MKRN4PQ13434 485 aaPredicted RBP10.8□□□□□ -0.68
CCDC178-211ENST00000581852 AKT1S1Q96B36 256 aa10.75□□□□□ -0.69
CCDC178-211ENST00000581852 SPDYE2BA6NHP3 402 aa10.74□□□□□ -0.69
CCDC178-211ENST00000581852 SPDYE6P0CI01 402 aa10.74□□□□□ -0.69
CCDC178-211ENST00000581852 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
CCDC178-211ENST00000581852 ZNF692Q9BU19 519 aaPredicted RBP10.68□□□□□ -0.7
CCDC178-211ENST00000581852 REM2Q8IYK8 340 aaPredicted RBP10.63□□□□□ -0.71
CCDC178-211ENST00000581852 SSUH2Q9Y2M2 353 aa10.58□□□□□ -0.72
CCDC178-211ENST00000581852 CHRDL2Q6WN34 429 aa10.56□□□□□ -0.72
CCDC178-211ENST00000581852 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.73
CCDC178-211ENST00000581852 PABPN1Q86U42 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCDC178-211ENST00000581852 PITPNM1O00562 1244 aa10.5□□□□□ -0.73
CCDC178-211ENST00000581852 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
CCDC178-211ENST00000581852 CLEC11AQ9Y240 323 aa10.48□□□□□ -0.73
CCDC178-211ENST00000581852 SP7Q8TDD2 431 aaPredicted RBP10.41□□□□□ -0.74
CCDC178-211ENST00000581852 PIP4P2Q8N4L2 257 aa10.36□□□□□ -0.75
CCDC178-211ENST00000581852 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
CCDC178-211ENST00000581852 FXR2P51116 673 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC178-211ENST00000581852 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
CCDC178-211ENST00000581852 FKBP8Q14318 412 aa10.3□□□□□ -0.76
CCDC178-211ENST00000581852 PRKAR2AP13861 404 aaKnown RBP10.26□□□□□ -0.77
CCDC178-211ENST00000581852 PROM2Q8N271 834 aa10.22□□□□□ -0.77
CCDC178-211ENST00000581852 CHADLQ6NUI6 762 aa10.19□□□□□ -0.78
CCDC178-211ENST00000581852 HAX1O00165 279 aa10.15□□□□□ -0.78
CCDC178-211ENST00000581852 CREBZFQ9NS37 354 aa10.09□□□□□ -0.79
CCDC178-211ENST00000581852 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
CCDC178-211ENST00000581852 PLEKHG5O94827 1062 aa10.06□□□□□ -0.8
CCDC178-211ENST00000581852 MIER1Q8N108 512 aa10.04□□□□□ -0.8
CCDC178-211ENST00000581852 FBXO3Q9UK99 471 aa10.04□□□□□ -0.8
CCDC178-211ENST00000581852 EVX2Q03828 476 aa10.03□□□□□ -0.8
CCDC178-211ENST00000581852 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
CCDC178-211ENST00000581852 PLCD3Q8N3E9 789 aa10.01□□□□□ -0.81
CCDC178-211ENST00000581852 C19orf67A6NJJ6 358 aa10□□□□□ -0.81
CCDC178-211ENST00000581852 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
CCDC178-211ENST00000581852 PAK3O75914 559 aaPredicted RBP9.92□□□□□ -0.82
CCDC178-211ENST00000581852 MNX1P50219 401 aaPredicted RBP9.92□□□□□ -0.82
CCDC178-211ENST00000581852 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
CCDC178-211ENST00000581852 ZRANB1Q9UGI0 708 aa9.88□□□□□ -0.83
CCDC178-211ENST00000581852 VASPP50552 380 aaPredicted RBP9.86□□□□□ -0.83
CCDC178-211ENST00000581852 KLHL34Q8N239 644 aa9.82□□□□□ -0.84
CCDC178-211ENST00000581852 TSPYL2Q9H2G4 693 aaPredicted RBP9.81□□□□□ -0.84
CCDC178-211ENST00000581852 CLCN6P51797 869 aa9.8□□□□□ -0.84
CCDC178-211ENST00000581852 GABBR2O75899 941 aa9.79□□□□□ -0.84
CCDC178-211ENST00000581852 ZNF579Q8NAF0 562 aaKnown RBP9.79□□□□□ -0.84
CCDC178-211ENST00000581852 LHX8Q68G74 356 aa9.76□□□□□ -0.85
CCDC178-211ENST00000581852 RASEFQ8IZ41 740 aa9.74□□□□□ -0.85
CCDC178-211ENST00000581852 NUBP1P53384 320 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms