RNA–Protein interactions for RNA: ENST00000606476.1

LINC00993-204, long intergenic non-protein coding RNA 993, humanhuman

TSL 5 BASIC

Gene LINC00993, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-204ENST00000606476 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
LINC00993-204ENST00000606476 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
LINC00993-204ENST00000606476 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
LINC00993-204ENST00000606476 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
LINC00993-204ENST00000606476 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
LINC00993-204ENST00000606476 FOXD1Q16676 465 aa16.58■□□□□ 0.24
LINC00993-204ENST00000606476 MSH5O43196 834 aa15.91■□□□□ 0.14
LINC00993-204ENST00000606476 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
LINC00993-204ENST00000606476 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
LINC00993-204ENST00000606476 CACNB1Q02641 598 aaPredicted RBP14.53□□□□□ -0.08
LINC00993-204ENST00000606476 ADRA2BP18089 450 aa14.4□□□□□ -0.1
LINC00993-204ENST00000606476 POTEHQ6S545 545 aa13.75□□□□□ -0.21
LINC00993-204ENST00000606476 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
LINC00993-204ENST00000606476 DMRT2Q9Y5R5 561 aa13.71□□□□□ -0.21
LINC00993-204ENST00000606476 MAPK8IP2Q13387 824 aaPredicted RBP13.66□□□□□ -0.22
LINC00993-204ENST00000606476 RNF39Q9H2S5 420 aa13.52□□□□□ -0.25
LINC00993-204ENST00000606476 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
LINC00993-204ENST00000606476 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
LINC00993-204ENST00000606476 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
LINC00993-204ENST00000606476 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
LINC00993-204ENST00000606476 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
LINC00993-204ENST00000606476 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
LINC00993-204ENST00000606476 DSG3P32926 999 aa12.23□□□□□ -0.45
LINC00993-204ENST00000606476 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
LINC00993-204ENST00000606476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC00993-204ENST00000606476 SPINK5Q9NQ38 1064 aaPredicted RBP12□□□□□ -0.49
LINC00993-204ENST00000606476 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
LINC00993-204ENST00000606476 CAPN15O75808 1086 aa11.97□□□□□ -0.49
LINC00993-204ENST00000606476 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
LINC00993-204ENST00000606476 CNKSR2Q8WXI2 1034 aa11.96□□□□□ -0.49
LINC00993-204ENST00000606476 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
LINC00993-204ENST00000606476 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
LINC00993-204ENST00000606476 ABCB7O75027 752 aa11.64□□□□□ -0.55
LINC00993-204ENST00000606476 RBM42Q9BTD8 480 aaKnown RBP11.58□□□□□ -0.56
LINC00993-204ENST00000606476 HAX1O00165 279 aa11.54□□□□□ -0.56
LINC00993-204ENST00000606476 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
LINC00993-204ENST00000606476 LHX8Q68G74 356 aa11.48□□□□□ -0.57
LINC00993-204ENST00000606476 EVX2Q03828 476 aa11.41□□□□□ -0.58
LINC00993-204ENST00000606476 PIP4P2Q8N4L2 257 aa11.41□□□□□ -0.58
LINC00993-204ENST00000606476 ZNF219Q9P2Y4 722 aaPredicted RBP11.31□□□□□ -0.6
LINC00993-204ENST00000606476 FXR2P51116 673 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00993-204ENST00000606476 AKT1S1Q96B36 256 aa11.08□□□□□ -0.64
LINC00993-204ENST00000606476 APLP2Q06481 763 aa11.05□□□□□ -0.64
LINC00993-204ENST00000606476 REM2Q8IYK8 340 aaPredicted RBP11.04□□□□□ -0.64
LINC00993-204ENST00000606476 GABBR2O75899 941 aa10.99□□□□□ -0.65
LINC00993-204ENST00000606476 PITPNM1O00562 1244 aa10.96□□□□□ -0.65
LINC00993-204ENST00000606476 NCBP3Q53F19 620 aaKnown RBP10.96□□□□□ -0.65
LINC00993-204ENST00000606476 NPM3O75607 178 aaKnown RBP10.94□□□□□ -0.66
LINC00993-204ENST00000606476 POTEMA6NI47 508 aa10.89□□□□□ -0.67
LINC00993-204ENST00000606476 POLA2Q14181 598 aa10.85□□□□□ -0.67
LINC00993-204ENST00000606476 SLC4A2P04920 1241 aa10.82□□□□□ -0.68
LINC00993-204ENST00000606476 POTEIP0CG38 1075 aa10.81□□□□□ -0.68
LINC00993-204ENST00000606476 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
LINC00993-204ENST00000606476 C19orf67A6NJJ6 358 aa10.8□□□□□ -0.68
LINC00993-204ENST00000606476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
LINC00993-204ENST00000606476 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
LINC00993-204ENST00000606476 SAMD1Q6SPF0 538 aaPredicted RBP10.68□□□□□ -0.7
LINC00993-204ENST00000606476 PCDH10Q9P2E7 1040 aa10.65□□□□□ -0.7
LINC00993-204ENST00000606476 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
LINC00993-204ENST00000606476 OTUD5Q96G74 571 aa10.63□□□□□ -0.71
LINC00993-204ENST00000606476 NISCHQ9Y2I1 1504 aa10.61□□□□□ -0.71
LINC00993-204ENST00000606476 OSCARQ8IYS5 282 aa10.59□□□□□ -0.71
LINC00993-204ENST00000606476 POTEB2H3BUK9 544 aa10.44□□□□□ -0.74
LINC00993-204ENST00000606476 ZBTB12Q9Y330 459 aaPredicted RBP10.39□□□□□ -0.75
LINC00993-204ENST00000606476 LCE2DQ5TA82 110 aaPredicted RBP10.35□□□□□ -0.75
LINC00993-204ENST00000606476 DCBLD2Q96PD2 775 aa10.35□□□□□ -0.75
LINC00993-204ENST00000606476 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
LINC00993-204ENST00000606476 CLEC11AQ9Y240 323 aa10.29□□□□□ -0.76
LINC00993-204ENST00000606476 CD44P16070 742 aaKnown RBP10.22□□□□□ -0.77
LINC00993-204ENST00000606476 SPDYE1Q8NFV5 336 aaPredicted RBP10.18□□□□□ -0.78
LINC00993-204ENST00000606476 FAM163AQ96GL9 167 aaPredicted RBP10.18□□□□□ -0.78
LINC00993-204ENST00000606476 CLCN6P51797 869 aa10.16□□□□□ -0.78
LINC00993-204ENST00000606476 CDAN1Q8IWY9 1227 aa10.1□□□□□ -0.79
LINC00993-204ENST00000606476 ATF5Q9Y2D1 282 aaPredicted RBP10.1□□□□□ -0.79
LINC00993-204ENST00000606476 POTEJP0CG39 1038 aa10.08□□□□□ -0.8
LINC00993-204ENST00000606476 MYCNP04198 464 aaPredicted RBP10.07□□□□□ -0.8
LINC00993-204ENST00000606476 MMRN1Q13201 1228 aa10.03□□□□□ -0.8
LINC00993-204ENST00000606476 SPDYE2BA6NHP3 402 aa10.02□□□□□ -0.81
LINC00993-204ENST00000606476 GALR2O43603 387 aaPredicted RBP10.02□□□□□ -0.81
LINC00993-204ENST00000606476 SPDYE6P0CI01 402 aa10.02□□□□□ -0.81
LINC00993-204ENST00000606476 SPDYE2Q495Y8 402 aa10.02□□□□□ -0.81
LINC00993-204ENST00000606476 PELP1Q8IZL8 1130 aaKnown RBP9.98□□□□□ -0.81
LINC00993-204ENST00000606476 ZNF579Q8NAF0 562 aaKnown RBP9.98□□□□□ -0.81
LINC00993-204ENST00000606476 FARP1Q9Y4F1 1045 aaPredicted RBP9.94□□□□□ -0.82
LINC00993-204ENST00000606476 SPNS2Q8IVW8 549 aa9.9□□□□□ -0.82
LINC00993-204ENST00000606476 PRR29P0C7W0 189 aa9.88□□□□□ -0.83
LINC00993-204ENST00000606476 MAMSTRQ6ZN01 415 aa9.88□□□□□ -0.83
LINC00993-204ENST00000606476 ZRANB1Q9UGI0 708 aa9.87□□□□□ -0.83
LINC00993-204ENST00000606476 METRNQ9UJH8 293 aa9.85□□□□□ -0.83
LINC00993-204ENST00000606476 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
LINC00993-204ENST00000606476 SCUBE2Q9NQ36 999 aa9.78□□□□□ -0.84
LINC00993-204ENST00000606476 ZNF692Q9BU19 519 aaPredicted RBP9.72□□□□□ -0.85
LINC00993-204ENST00000606476 C7P10643 843 aa9.71□□□□□ -0.86
LINC00993-204ENST00000606476 SLC39A7Q92504 469 aa9.7□□□□□ -0.86
LINC00993-204ENST00000606476 PHF12Q96QT6 1004 aa9.68□□□□□ -0.86
LINC00993-204ENST00000606476 ASTLQ6HA08 431 aaPredicted RBP9.65□□□□□ -0.86
LINC00993-204ENST00000606476 ATMINO43313 823 aaPredicted RBP9.63□□□□□ -0.87
LINC00993-204ENST00000606476 ST18O60284 1047 aa9.62□□□□□ -0.87
LINC00993-204ENST00000606476 FBLN2P98095 1184 aa9.62□□□□□ -0.87
LINC00993-204ENST00000606476 KCNA4P22459 653 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms