RNA–Protein interactions for RNA: ENST00000438179.1

PRPF38AP2-201, Transcript of PRP38 domain containing A pseudogene 2, humanhuman

BASIC

Gene PRPF38AP2, Length 851 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AP2-201ENST00000438179 AEBP2Q6ZN18 517 aaPredicted RBP19.21■□□□□ 0.67
PRPF38AP2-201ENST00000438179 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
PRPF38AP2-201ENST00000438179 SENP3Q9H4L4 574 aaPredicted RBP16.64■□□□□ 0.25
PRPF38AP2-201ENST00000438179 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
PRPF38AP2-201ENST00000438179 FOXD1Q16676 465 aa15.3■□□□□ 0.04
PRPF38AP2-201ENST00000438179 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
PRPF38AP2-201ENST00000438179 MSH5O43196 834 aa14.5□□□□□ -0.09
PRPF38AP2-201ENST00000438179 PIAS4Q8N2W9 510 aaPredicted RBP14.44□□□□□ -0.1
PRPF38AP2-201ENST00000438179 ADRA2BP18089 450 aa14.32□□□□□ -0.12
PRPF38AP2-201ENST00000438179 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
PRPF38AP2-201ENST00000438179 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
PRPF38AP2-201ENST00000438179 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
PRPF38AP2-201ENST00000438179 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
PRPF38AP2-201ENST00000438179 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
PRPF38AP2-201ENST00000438179 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
PRPF38AP2-201ENST00000438179 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
PRPF38AP2-201ENST00000438179 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
PRPF38AP2-201ENST00000438179 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
PRPF38AP2-201ENST00000438179 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
PRPF38AP2-201ENST00000438179 DCAF8L1A6NGE4 600 aa12.62□□□□□ -0.39
PRPF38AP2-201ENST00000438179 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
PRPF38AP2-201ENST00000438179 NPM3O75607 178 aaKnown RBP12.38□□□□□ -0.43
PRPF38AP2-201ENST00000438179 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
PRPF38AP2-201ENST00000438179 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
PRPF38AP2-201ENST00000438179 KCNA4P22459 653 aa12.22□□□□□ -0.45
PRPF38AP2-201ENST00000438179 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
PRPF38AP2-201ENST00000438179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.46
PRPF38AP2-201ENST00000438179 NISCHQ9Y2I1 1504 aa11.96□□□□□ -0.49
PRPF38AP2-201ENST00000438179 APLP2Q06481 763 aa11.85□□□□□ -0.51
PRPF38AP2-201ENST00000438179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.82□□□□□ -0.52
PRPF38AP2-201ENST00000438179 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
PRPF38AP2-201ENST00000438179 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
PRPF38AP2-201ENST00000438179 SLC4A2P04920 1241 aa11.71□□□□□ -0.53
PRPF38AP2-201ENST00000438179 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
PRPF38AP2-201ENST00000438179 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
PRPF38AP2-201ENST00000438179 CAPN15O75808 1086 aa11.66□□□□□ -0.54
PRPF38AP2-201ENST00000438179 ZNF219Q9P2Y4 722 aaPredicted RBP11.61□□□□□ -0.55
PRPF38AP2-201ENST00000438179 ABCC9O60706 1549 aa11.6□□□□□ -0.55
PRPF38AP2-201ENST00000438179 MYCNP04198 464 aaPredicted RBP11.59□□□□□ -0.55
PRPF38AP2-201ENST00000438179 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
PRPF38AP2-201ENST00000438179 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
PRPF38AP2-201ENST00000438179 DSG3P32926 999 aa11.49□□□□□ -0.57
PRPF38AP2-201ENST00000438179 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
PRPF38AP2-201ENST00000438179 ABCB7O75027 752 aa11.31□□□□□ -0.6
PRPF38AP2-201ENST00000438179 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
PRPF38AP2-201ENST00000438179 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
PRPF38AP2-201ENST00000438179 POLA2Q14181 598 aa11.19□□□□□ -0.62
PRPF38AP2-201ENST00000438179 RBM42Q9BTD8 480 aaKnown RBP11.19□□□□□ -0.62
PRPF38AP2-201ENST00000438179 ZBTB22O15209 634 aa11.14□□□□□ -0.63
PRPF38AP2-201ENST00000438179 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
PRPF38AP2-201ENST00000438179 ATF5Q9Y2D1 282 aaPredicted RBP11.04□□□□□ -0.64
PRPF38AP2-201ENST00000438179 FBLN2P98095 1184 aa10.93□□□□□ -0.66
PRPF38AP2-201ENST00000438179 CCDC180Q9P1Z9 1646 aa10.93□□□□□ -0.66
PRPF38AP2-201ENST00000438179 AKT1S1Q96B36 256 aa10.86□□□□□ -0.67
PRPF38AP2-201ENST00000438179 POTEHQ6S545 545 aa10.83□□□□□ -0.68
PRPF38AP2-201ENST00000438179 CSRNP3Q8WYN3 585 aa10.83□□□□□ -0.68
PRPF38AP2-201ENST00000438179 OSCARQ8IYS5 282 aa10.81□□□□□ -0.68
PRPF38AP2-201ENST00000438179 EHMT2Q96KQ7 1210 aa10.81□□□□□ -0.68
PRPF38AP2-201ENST00000438179 SPDYE2BA6NHP3 402 aa10.76□□□□□ -0.69
PRPF38AP2-201ENST00000438179 SPDYE6P0CI01 402 aa10.76□□□□□ -0.69
PRPF38AP2-201ENST00000438179 SPDYE2Q495Y8 402 aa10.76□□□□□ -0.69
PRPF38AP2-201ENST00000438179 RB1CC1Q8TDY2 1594 aa10.75□□□□□ -0.69
PRPF38AP2-201ENST00000438179 CHRDL2Q6WN34 429 aa10.73□□□□□ -0.69
PRPF38AP2-201ENST00000438179 PABPN1Q86U42 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
PRPF38AP2-201ENST00000438179 REM2Q8IYK8 340 aaPredicted RBP10.67□□□□□ -0.7
PRPF38AP2-201ENST00000438179 ZNF692Q9BU19 519 aaPredicted RBP10.61□□□□□ -0.71
PRPF38AP2-201ENST00000438179 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
PRPF38AP2-201ENST00000438179 SPDYE1Q8NFV5 336 aaPredicted RBP10.55□□□□□ -0.72
PRPF38AP2-201ENST00000438179 SSUH2Q9Y2M2 353 aa10.54□□□□□ -0.72
PRPF38AP2-201ENST00000438179 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
PRPF38AP2-201ENST00000438179 NACADO15069 1562 aa10.53□□□□□ -0.72
PRPF38AP2-201ENST00000438179 PITPNM1O00562 1244 aa10.53□□□□□ -0.72
PRPF38AP2-201ENST00000438179 PIP4P2Q8N4L2 257 aa10.45□□□□□ -0.74
PRPF38AP2-201ENST00000438179 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
PRPF38AP2-201ENST00000438179 BICRAQ9NZM4 1560 aa10.43□□□□□ -0.74
PRPF38AP2-201ENST00000438179 FXR2P51116 673 aaKnown RBP eCLIP10.43□□□□□ -0.74
PRPF38AP2-201ENST00000438179 CC2D2AQ9P2K1 1620 aa10.42□□□□□ -0.74
PRPF38AP2-201ENST00000438179 UNC13AQ9UPW8 1703 aa10.41□□□□□ -0.74
PRPF38AP2-201ENST00000438179 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
PRPF38AP2-201ENST00000438179 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
PRPF38AP2-201ENST00000438179 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
PRPF38AP2-201ENST00000438179 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
PRPF38AP2-201ENST00000438179 PRKAR2AP13861 404 aaKnown RBP10.31□□□□□ -0.76
PRPF38AP2-201ENST00000438179 HAX1O00165 279 aa10.29□□□□□ -0.76
PRPF38AP2-201ENST00000438179 CUX2O14529 1486 aa10.29□□□□□ -0.76
PRPF38AP2-201ENST00000438179 SHROOM4Q9ULL8 1493 aa10.29□□□□□ -0.76
PRPF38AP2-201ENST00000438179 TRIM41Q8WV44 630 aa10.28□□□□□ -0.76
PRPF38AP2-201ENST00000438179 SP7Q8TDD2 431 aaPredicted RBP10.25□□□□□ -0.77
PRPF38AP2-201ENST00000438179 EIF4G1Q04637 1599 aaKnown RBP10.25□□□□□ -0.77
PRPF38AP2-201ENST00000438179 MYO15BQ96JP2 1530 aa10.19□□□□□ -0.78
PRPF38AP2-201ENST00000438179 CHADLQ6NUI6 762 aa10.11□□□□□ -0.79
PRPF38AP2-201ENST00000438179 C19orf67A6NJJ6 358 aa10.09□□□□□ -0.79
PRPF38AP2-201ENST00000438179 ERCC6Q03468 1493 aa10.09□□□□□ -0.79
PRPF38AP2-201ENST00000438179 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
PRPF38AP2-201ENST00000438179 CLCN6P51797 869 aa10.06□□□□□ -0.8
PRPF38AP2-201ENST00000438179 PLEKHG5O94827 1062 aa10.04□□□□□ -0.8
PRPF38AP2-201ENST00000438179 PROM2Q8N271 834 aa10.03□□□□□ -0.8
PRPF38AP2-201ENST00000438179 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
PRPF38AP2-201ENST00000438179 PAK3O75914 559 aaPredicted RBP10.01□□□□□ -0.81
PRPF38AP2-201ENST00000438179 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms