RNA–Protein interactions for RNA: ENST00000438179.1

PRPF38AP2-201, Transcript of PRP38 domain containing A pseudogene 2, humanhuman

BASIC

Gene PRPF38AP2, Length 851 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AP2-201ENST00000438179 AEBP2Q6ZN18 517 aaPredicted RBP19.21■□□□□ 0.67
PRPF38AP2-201ENST00000438179 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
PRPF38AP2-201ENST00000438179 SENP3Q9H4L4 574 aaPredicted RBP16.64■□□□□ 0.25
PRPF38AP2-201ENST00000438179 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
PRPF38AP2-201ENST00000438179 FOXD1Q16676 465 aa15.3■□□□□ 0.04
PRPF38AP2-201ENST00000438179 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
PRPF38AP2-201ENST00000438179 MSH5O43196 834 aa14.5□□□□□ -0.09
PRPF38AP2-201ENST00000438179 PIAS4Q8N2W9 510 aaPredicted RBP14.44□□□□□ -0.1
PRPF38AP2-201ENST00000438179 ADRA2BP18089 450 aa14.32□□□□□ -0.12
PRPF38AP2-201ENST00000438179 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
PRPF38AP2-201ENST00000438179 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
PRPF38AP2-201ENST00000438179 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
PRPF38AP2-201ENST00000438179 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
PRPF38AP2-201ENST00000438179 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
PRPF38AP2-201ENST00000438179 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
PRPF38AP2-201ENST00000438179 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
PRPF38AP2-201ENST00000438179 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
PRPF38AP2-201ENST00000438179 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
PRPF38AP2-201ENST00000438179 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
PRPF38AP2-201ENST00000438179 DCAF8L1A6NGE4 600 aa12.62□□□□□ -0.39
PRPF38AP2-201ENST00000438179 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
PRPF38AP2-201ENST00000438179 NPM3O75607 178 aaKnown RBP12.38□□□□□ -0.43
PRPF38AP2-201ENST00000438179 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
PRPF38AP2-201ENST00000438179 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
PRPF38AP2-201ENST00000438179 KCNA4P22459 653 aa12.22□□□□□ -0.45
PRPF38AP2-201ENST00000438179 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
PRPF38AP2-201ENST00000438179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.46
PRPF38AP2-201ENST00000438179 NISCHQ9Y2I1 1504 aa11.96□□□□□ -0.49
PRPF38AP2-201ENST00000438179 APLP2Q06481 763 aa11.85□□□□□ -0.51
PRPF38AP2-201ENST00000438179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.82□□□□□ -0.52
PRPF38AP2-201ENST00000438179 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
PRPF38AP2-201ENST00000438179 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
PRPF38AP2-201ENST00000438179 SLC4A2P04920 1241 aa11.71□□□□□ -0.53
PRPF38AP2-201ENST00000438179 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
PRPF38AP2-201ENST00000438179 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
PRPF38AP2-201ENST00000438179 CAPN15O75808 1086 aa11.66□□□□□ -0.54
PRPF38AP2-201ENST00000438179 ZNF219Q9P2Y4 722 aaPredicted RBP11.61□□□□□ -0.55
PRPF38AP2-201ENST00000438179 ABCC9O60706 1549 aa11.6□□□□□ -0.55
PRPF38AP2-201ENST00000438179 MYCNP04198 464 aaPredicted RBP11.59□□□□□ -0.55
PRPF38AP2-201ENST00000438179 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
PRPF38AP2-201ENST00000438179 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
PRPF38AP2-201ENST00000438179 DSG3P32926 999 aa11.49□□□□□ -0.57
PRPF38AP2-201ENST00000438179 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
PRPF38AP2-201ENST00000438179 ABCB7O75027 752 aa11.31□□□□□ -0.6
PRPF38AP2-201ENST00000438179 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
PRPF38AP2-201ENST00000438179 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
PRPF38AP2-201ENST00000438179 POLA2Q14181 598 aa11.19□□□□□ -0.62
PRPF38AP2-201ENST00000438179 RBM42Q9BTD8 480 aaKnown RBP11.19□□□□□ -0.62
PRPF38AP2-201ENST00000438179 ZBTB22O15209 634 aa11.14□□□□□ -0.63
PRPF38AP2-201ENST00000438179 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
PRPF38AP2-201ENST00000438179 ATF5Q9Y2D1 282 aaPredicted RBP11.04□□□□□ -0.64
PRPF38AP2-201ENST00000438179 FBLN2P98095 1184 aa10.93□□□□□ -0.66
PRPF38AP2-201ENST00000438179 CCDC180Q9P1Z9 1646 aa10.93□□□□□ -0.66
PRPF38AP2-201ENST00000438179 AKT1S1Q96B36 256 aa10.86□□□□□ -0.67
PRPF38AP2-201ENST00000438179 POTEHQ6S545 545 aa10.83□□□□□ -0.68
PRPF38AP2-201ENST00000438179 CSRNP3Q8WYN3 585 aa10.83□□□□□ -0.68
PRPF38AP2-201ENST00000438179 OSCARQ8IYS5 282 aa10.81□□□□□ -0.68
PRPF38AP2-201ENST00000438179 EHMT2Q96KQ7 1210 aa10.81□□□□□ -0.68
PRPF38AP2-201ENST00000438179 SPDYE2BA6NHP3 402 aa10.76□□□□□ -0.69
PRPF38AP2-201ENST00000438179 SPDYE6P0CI01 402 aa10.76□□□□□ -0.69
PRPF38AP2-201ENST00000438179 SPDYE2Q495Y8 402 aa10.76□□□□□ -0.69
PRPF38AP2-201ENST00000438179 RB1CC1Q8TDY2 1594 aa10.75□□□□□ -0.69
PRPF38AP2-201ENST00000438179 CHRDL2Q6WN34 429 aa10.73□□□□□ -0.69
PRPF38AP2-201ENST00000438179 PABPN1Q86U42 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
PRPF38AP2-201ENST00000438179 REM2Q8IYK8 340 aaPredicted RBP10.67□□□□□ -0.7
PRPF38AP2-201ENST00000438179 ZNF692Q9BU19 519 aaPredicted RBP10.61□□□□□ -0.71
PRPF38AP2-201ENST00000438179 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
PRPF38AP2-201ENST00000438179 SPDYE1Q8NFV5 336 aaPredicted RBP10.55□□□□□ -0.72
PRPF38AP2-201ENST00000438179 SSUH2Q9Y2M2 353 aa10.54□□□□□ -0.72
PRPF38AP2-201ENST00000438179 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
PRPF38AP2-201ENST00000438179 NACADO15069 1562 aa10.53□□□□□ -0.72
PRPF38AP2-201ENST00000438179 PITPNM1O00562 1244 aa10.53□□□□□ -0.72
PRPF38AP2-201ENST00000438179 PIP4P2Q8N4L2 257 aa10.45□□□□□ -0.74
PRPF38AP2-201ENST00000438179 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
PRPF38AP2-201ENST00000438179 BICRAQ9NZM4 1560 aa10.43□□□□□ -0.74
PRPF38AP2-201ENST00000438179 FXR2P51116 673 aaKnown RBP eCLIP10.43□□□□□ -0.74
PRPF38AP2-201ENST00000438179 CC2D2AQ9P2K1 1620 aa10.42□□□□□ -0.74
PRPF38AP2-201ENST00000438179 UNC13AQ9UPW8 1703 aa10.41□□□□□ -0.74
PRPF38AP2-201ENST00000438179 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
PRPF38AP2-201ENST00000438179 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
PRPF38AP2-201ENST00000438179 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
PRPF38AP2-201ENST00000438179 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
PRPF38AP2-201ENST00000438179 PRKAR2AP13861 404 aaKnown RBP10.31□□□□□ -0.76
PRPF38AP2-201ENST00000438179 HAX1O00165 279 aa10.29□□□□□ -0.76
PRPF38AP2-201ENST00000438179 CUX2O14529 1486 aa10.29□□□□□ -0.76
PRPF38AP2-201ENST00000438179 SHROOM4Q9ULL8 1493 aa10.29□□□□□ -0.76
PRPF38AP2-201ENST00000438179 TRIM41Q8WV44 630 aa10.28□□□□□ -0.76
PRPF38AP2-201ENST00000438179 SP7Q8TDD2 431 aaPredicted RBP10.25□□□□□ -0.77
PRPF38AP2-201ENST00000438179 EIF4G1Q04637 1599 aaKnown RBP10.25□□□□□ -0.77
PRPF38AP2-201ENST00000438179 MYO15BQ96JP2 1530 aa10.19□□□□□ -0.78
PRPF38AP2-201ENST00000438179 CHADLQ6NUI6 762 aa10.11□□□□□ -0.79
PRPF38AP2-201ENST00000438179 C19orf67A6NJJ6 358 aa10.09□□□□□ -0.79
PRPF38AP2-201ENST00000438179 ERCC6Q03468 1493 aa10.09□□□□□ -0.79
PRPF38AP2-201ENST00000438179 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
PRPF38AP2-201ENST00000438179 CLCN6P51797 869 aa10.06□□□□□ -0.8
PRPF38AP2-201ENST00000438179 PLEKHG5O94827 1062 aa10.04□□□□□ -0.8
PRPF38AP2-201ENST00000438179 PROM2Q8N271 834 aa10.03□□□□□ -0.8
PRPF38AP2-201ENST00000438179 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
PRPF38AP2-201ENST00000438179 PAK3O75914 559 aaPredicted RBP10.01□□□□□ -0.81
PRPF38AP2-201ENST00000438179 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms