Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HIPK4Q8NE63 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HIPK4Q8NE63 BIN2P1-201ENST00000504996 1530 ntBASIC6.2□□□□□ -1.42
HIPK4Q8NE63 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 ELL2P3-201ENST00000457883 1602 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 RNU5A-2P-201ENST00000384337 116 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 DNAJC19P6-201ENST00000401853 280 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 NFU1P1-201ENST00000413128 774 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 RPS26P38-201ENST00000414476 348 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC246680.2-201ENST00000422106 389 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AL365203.2-201ENST00000423444 196 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 USP9YP14-201ENST00000430663 563 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 Z84478.1-201ENST00000438230 1219 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 PA2G4P6-201ENST00000438325 1197 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 EMC3-AS1-205ENST00000438698 534 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC103563.5-201ENST00000455643 364 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC107015.1-201ENST00000466902 747 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 RN7SL390P-201ENST00000470634 284 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 MTND4P2-201ENST00000507767 1203 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 NPM1P21-201ENST00000513394 762 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 TMEM97P2-201ENST00000517841 403 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC107952.1-201ENST00000524200 376 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 SNRPCP6-201ENST00000528310 210 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 PDCL2P2-201ENST00000533651 189 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC092865.1-201ENST00000544395 1023 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AL121579.2-201ENST00000555466 590 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC233702.7-202ENST00000582941 211 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 MIR4428-201ENST00000584884 73 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC024451.4-201ENST00000602578 752 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AL049840.5-201ENST00000602827 552 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AL583856.2-201ENST00000606298 543 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AL121782.1-201ENST00000611242 413 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 HULC.1-201ENST00000612720 240 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AL158163.2-201ENST00000619110 700 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AL158062.1-201ENST00000619632 745 ntBASIC6.19□□□□□ -1.42
HIPK4Q8NE63 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HIPK4Q8NE63 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC6.18□□□□□ -1.42
HIPK4Q8NE63 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HIPK4Q8NE63 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HIPK4Q8NE63 VN2R3P-201ENST00000422626 1412 ntBASIC6.18□□□□□ -1.42
HIPK4Q8NE63 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HIPK4Q8NE63 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.18□□□□□ -1.42
HIPK4Q8NE63 AL359976.1-201ENST00000418655 3528 ntBASIC6.18□□□□□ -1.42
HIPK4Q8NE63 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HIPK4Q8NE63 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HIPK4Q8NE63 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HIPK4Q8NE63 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HIPK4Q8NE63 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HIPK4Q8NE63 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HIPK4Q8NE63 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms