RNA–Protein interactions for RNA: ENST00000561308.5

LINS1-214, Transcript of lines homolog 1, humanhuman

TSL 1 (best) BASIC

Gene LINS1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-214ENST00000561308 AEBP2Q6ZN18 517 aaPredicted RBP29.2■■■□□ 2.27
LINS1-214ENST00000561308 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
LINS1-214ENST00000561308 SENP3Q9H4L4 574 aaPredicted RBP24.91■■□□□ 1.58
LINS1-214ENST00000561308 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
LINS1-214ENST00000561308 FOXD1Q16676 465 aa23.19■■□□□ 1.3
LINS1-214ENST00000561308 PLPPR3Q6T4P5 718 aa22.35■■□□□ 1.17
LINS1-214ENST00000561308 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
LINS1-214ENST00000561308 ADRA2BP18089 450 aa21.73■■□□□ 1.07
LINS1-214ENST00000561308 PIAS4Q8N2W9 510 aaPredicted RBP21.72■■□□□ 1.07
LINS1-214ENST00000561308 MSH5O43196 834 aa21.67■■□□□ 1.06
LINS1-214ENST00000561308 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
LINS1-214ENST00000561308 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
LINS1-214ENST00000561308 MAPK8IP2Q13387 824 aaPredicted RBP19.91■□□□□ 0.78
LINS1-214ENST00000561308 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
LINS1-214ENST00000561308 PPP4R3CPQ6ZMV5 832 aa19.6■□□□□ 0.73
LINS1-214ENST00000561308 CNKSR2Q8WXI2 1034 aa19.21■□□□□ 0.67
LINS1-214ENST00000561308 HOXD11P31277 338 aaPredicted RBP19.09■□□□□ 0.65
LINS1-214ENST00000561308 RNF216Q9NWF9 866 aaPredicted RBP19■□□□□ 0.63
LINS1-214ENST00000561308 DCAF8L1A6NGE4 600 aa18.98■□□□□ 0.63
LINS1-214ENST00000561308 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
LINS1-214ENST00000561308 NPM3O75607 178 aaKnown RBP18.61■□□□□ 0.57
LINS1-214ENST00000561308 CACNB1Q02641 598 aaPredicted RBP18.52■□□□□ 0.56
LINS1-214ENST00000561308 RNF39Q9H2S5 420 aa18.49■□□□□ 0.55
LINS1-214ENST00000561308 DNAJC5BQ9UF47 199 aa18.41■□□□□ 0.54
LINS1-214ENST00000561308 KCNA4P22459 653 aa18.38■□□□□ 0.53
LINS1-214ENST00000561308 C1QBPQ07021 282 aaKnown RBP18.24■□□□□ 0.51
LINS1-214ENST00000561308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.51
LINS1-214ENST00000561308 U3KPZ7 1027 aaPredicted RBP17.82■□□□□ 0.44
LINS1-214ENST00000561308 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
LINS1-214ENST00000561308 SPINK5Q9NQ38 1064 aaPredicted RBP17.53■□□□□ 0.4
LINS1-214ENST00000561308 CAPN15O75808 1086 aa17.52■□□□□ 0.4
LINS1-214ENST00000561308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.38
LINS1-214ENST00000561308 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.38
LINS1-214ENST00000561308 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.38
LINS1-214ENST00000561308 APLP2Q06481 763 aa17.38■□□□□ 0.37
LINS1-214ENST00000561308 DSG3P32926 999 aa17.36■□□□□ 0.37
LINS1-214ENST00000561308 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
LINS1-214ENST00000561308 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
LINS1-214ENST00000561308 ZNF219Q9P2Y4 722 aaPredicted RBP17.24■□□□□ 0.35
LINS1-214ENST00000561308 MYCNP04198 464 aaPredicted RBP17.22■□□□□ 0.35
LINS1-214ENST00000561308 ABCB7O75027 752 aa17.11■□□□□ 0.33
LINS1-214ENST00000561308 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
LINS1-214ENST00000561308 ZBTB22O15209 634 aa16.88■□□□□ 0.29
LINS1-214ENST00000561308 POLA2Q14181 598 aa16.82■□□□□ 0.28
LINS1-214ENST00000561308 ATF5Q9Y2D1 282 aaPredicted RBP16.8■□□□□ 0.28
LINS1-214ENST00000561308 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
LINS1-214ENST00000561308 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
LINS1-214ENST00000561308 ZBTB12Q9Y330 459 aaPredicted RBP16.52■□□□□ 0.23
LINS1-214ENST00000561308 POTEHQ6S545 545 aa16.42■□□□□ 0.22
LINS1-214ENST00000561308 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
LINS1-214ENST00000561308 CSRNP3Q8WYN3 585 aa16.23■□□□□ 0.19
LINS1-214ENST00000561308 AKT1S1Q96B36 256 aa16.23■□□□□ 0.19
LINS1-214ENST00000561308 FBLN2P98095 1184 aa16.17■□□□□ 0.18
LINS1-214ENST00000561308 CHRDL2Q6WN34 429 aa16.16■□□□□ 0.18
LINS1-214ENST00000561308 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
LINS1-214ENST00000561308 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
LINS1-214ENST00000561308 MKRN4PQ13434 485 aaPredicted RBP16.03■□□□□ 0.16
LINS1-214ENST00000561308 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
LINS1-214ENST00000561308 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
LINS1-214ENST00000561308 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
LINS1-214ENST00000561308 PITPNM1O00562 1244 aa15.89■□□□□ 0.13
LINS1-214ENST00000561308 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
LINS1-214ENST00000561308 PIP4P2Q8N4L2 257 aa15.79■□□□□ 0.12
LINS1-214ENST00000561308 SSUH2Q9Y2M2 353 aa15.79■□□□□ 0.12
LINS1-214ENST00000561308 FXR2P51116 673 aaKnown RBP eCLIP15.72■□□□□ 0.11
LINS1-214ENST00000561308 SPDYE1Q8NFV5 336 aaPredicted RBP15.7■□□□□ 0.1
LINS1-214ENST00000561308 CLEC11AQ9Y240 323 aa15.67■□□□□ 0.1
LINS1-214ENST00000561308 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
LINS1-214ENST00000561308 HAX1O00165 279 aa15.5■□□□□ 0.07
LINS1-214ENST00000561308 PRKAR2AP13861 404 aaKnown RBP15.49■□□□□ 0.07
LINS1-214ENST00000561308 SP7Q8TDD2 431 aaPredicted RBP15.46■□□□□ 0.06
LINS1-214ENST00000561308 PRR29P0C7W0 189 aa15.43■□□□□ 0.06
LINS1-214ENST00000561308 SPDYE4A6NLX3 237 aa15.37■□□□□ 0.05
LINS1-214ENST00000561308 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
LINS1-214ENST00000561308 EVX2Q03828 476 aa15.28■□□□□ 0.04
LINS1-214ENST00000561308 STAG3Q9UJ98 1225 aa15.22■□□□□ 0.03
LINS1-214ENST00000561308 C19orf67A6NJJ6 358 aa15.21■□□□□ 0.03
LINS1-214ENST00000561308 FARP1Q9Y4F1 1045 aaPredicted RBP15.13■□□□□ 0.01
LINS1-214ENST00000561308 CREBZFQ9NS37 354 aa15.06■□□□□ 0
LINS1-214ENST00000561308 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
LINS1-214ENST00000561308 PROM2Q8N271 834 aa14.99□□□□□ -0.01
LINS1-214ENST00000561308 GABBR2O75899 941 aa14.95□□□□□ -0.02
LINS1-214ENST00000561308 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
LINS1-214ENST00000561308 NPM1P06748 294 aaKnown RBP eCLIP14.81□□□□□ -0.04
LINS1-214ENST00000561308 MNX1P50219 401 aaPredicted RBP14.81□□□□□ -0.04
LINS1-214ENST00000561308 CLCN6P51797 869 aa14.79□□□□□ -0.04
LINS1-214ENST00000561308 ZNF579Q8NAF0 562 aaKnown RBP14.77□□□□□ -0.04
LINS1-214ENST00000561308 PAK3O75914 559 aaPredicted RBP14.75□□□□□ -0.05
LINS1-214ENST00000561308 FKBP8Q14318 412 aa14.74□□□□□ -0.05
LINS1-214ENST00000561308 MIER1Q8N108 512 aa14.66□□□□□ -0.06
LINS1-214ENST00000561308 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
LINS1-214ENST00000561308 POTEIP0CG38 1075 aa14.63□□□□□ -0.07
LINS1-214ENST00000561308 PHF12Q96QT6 1004 aa14.62□□□□□ -0.07
LINS1-214ENST00000561308 DCBLD2Q96PD2 775 aa14.61□□□□□ -0.07
LINS1-214ENST00000561308 GALR2O43603 387 aaPredicted RBP14.59□□□□□ -0.07
LINS1-214ENST00000561308 PLCD3Q8N3E9 789 aa14.56□□□□□ -0.08
LINS1-214ENST00000561308 TSPYL2Q9H2G4 693 aaPredicted RBP14.55□□□□□ -0.08
LINS1-214ENST00000561308 LHX8Q68G74 356 aa14.51□□□□□ -0.09
LINS1-214ENST00000561308 CCDC61Q9Y6R9 512 aa14.45□□□□□ -0.1
LINS1-214ENST00000561308 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms