RNA–Protein interactions for RNA: ENST00000612720.1

HULC.1-201, hepatocellular carcinoma up-regulated long non-coding RNA, humanhuman

BASIC

Gene HULC, Length 240 nt, Biotype misc RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HULC.1-201ENST00000612720 AEBP2Q6ZN18 517 aaPredicted RBP29.14■■■□□ 2.26
HULC.1-201ENST00000612720 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
HULC.1-201ENST00000612720 SENP3Q9H4L4 574 aaPredicted RBP24.72■■□□□ 1.55
HULC.1-201ENST00000612720 PHF23Q9BUL5 403 aaPredicted RBP24.48■■□□□ 1.51
HULC.1-201ENST00000612720 FOXD1Q16676 465 aa23.07■■□□□ 1.28
HULC.1-201ENST00000612720 PLPPR3Q6T4P5 718 aa22.29■■□□□ 1.16
HULC.1-201ENST00000612720 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
HULC.1-201ENST00000612720 ADRA2BP18089 450 aa21.68■■□□□ 1.06
HULC.1-201ENST00000612720 PIAS4Q8N2W9 510 aaPredicted RBP21.54■■□□□ 1.04
HULC.1-201ENST00000612720 MSH5O43196 834 aa21.43■■□□□ 1.02
HULC.1-201ENST00000612720 POTEDQ86YR6 584 aa20.59■□□□□ 0.89
HULC.1-201ENST00000612720 MAPK8IP2Q13387 824 aaPredicted RBP19.86■□□□□ 0.77
HULC.1-201ENST00000612720 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
HULC.1-201ENST00000612720 DMRT2Q9Y5R5 561 aa19.68■□□□□ 0.74
HULC.1-201ENST00000612720 PPP4R3CPQ6ZMV5 832 aa19.59■□□□□ 0.73
HULC.1-201ENST00000612720 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
HULC.1-201ENST00000612720 HOXD11P31277 338 aaPredicted RBP19.07■□□□□ 0.64
HULC.1-201ENST00000612720 RNF216Q9NWF9 866 aaPredicted RBP18.95■□□□□ 0.62
HULC.1-201ENST00000612720 NCBP3Q53F19 620 aaKnown RBP18.84■□□□□ 0.61
HULC.1-201ENST00000612720 DCAF8L1A6NGE4 600 aa18.72■□□□□ 0.59
HULC.1-201ENST00000612720 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
HULC.1-201ENST00000612720 KCNA4P22459 653 aa18.5■□□□□ 0.55
HULC.1-201ENST00000612720 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
HULC.1-201ENST00000612720 DNAJC5BQ9UF47 199 aa18.37■□□□□ 0.53
HULC.1-201ENST00000612720 CACNB1Q02641 598 aaPredicted RBP18.22■□□□□ 0.51
HULC.1-201ENST00000612720 C1QBPQ07021 282 aaKnown RBP18.07■□□□□ 0.48
HULC.1-201ENST00000612720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.05■□□□□ 0.48
HULC.1-201ENST00000612720 SLC4A2P04920 1241 aa17.8■□□□□ 0.44
HULC.1-201ENST00000612720 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
HULC.1-201ENST00000612720 SLC4A1APQ9BWU0 796 aaKnown RBP17.46■□□□□ 0.39
HULC.1-201ENST00000612720 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
HULC.1-201ENST00000612720 CAPN15O75808 1086 aa17.33■□□□□ 0.36
HULC.1-201ENST00000612720 DSG3P32926 999 aa17.27■□□□□ 0.36
HULC.1-201ENST00000612720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
HULC.1-201ENST00000612720 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
HULC.1-201ENST00000612720 MYCNP04198 464 aaPredicted RBP17.2■□□□□ 0.34
HULC.1-201ENST00000612720 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
HULC.1-201ENST00000612720 APLP2Q06481 763 aa17.19■□□□□ 0.34
HULC.1-201ENST00000612720 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
HULC.1-201ENST00000612720 TRHP20396 242 aaPredicted RBP17.11■□□□□ 0.33
HULC.1-201ENST00000612720 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
HULC.1-201ENST00000612720 ZBTB22O15209 634 aa17.08■□□□□ 0.32
HULC.1-201ENST00000612720 ABCB7O75027 752 aa16.98■□□□□ 0.31
HULC.1-201ENST00000612720 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
HULC.1-201ENST00000612720 POLA2Q14181 598 aa16.74■□□□□ 0.27
HULC.1-201ENST00000612720 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
HULC.1-201ENST00000612720 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
HULC.1-201ENST00000612720 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
HULC.1-201ENST00000612720 ZBTB12Q9Y330 459 aaPredicted RBP16.38■□□□□ 0.21
HULC.1-201ENST00000612720 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
HULC.1-201ENST00000612720 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
HULC.1-201ENST00000612720 POTEHQ6S545 545 aa16.15■□□□□ 0.18
HULC.1-201ENST00000612720 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
HULC.1-201ENST00000612720 AKT1S1Q96B36 256 aa16.11■□□□□ 0.17
HULC.1-201ENST00000612720 FBLN2P98095 1184 aa16.06■□□□□ 0.16
HULC.1-201ENST00000612720 CHRDL2Q6WN34 429 aa15.99■□□□□ 0.15
HULC.1-201ENST00000612720 REM2Q8IYK8 340 aaPredicted RBP15.97■□□□□ 0.15
HULC.1-201ENST00000612720 SPDYE2BA6NHP3 402 aa15.94■□□□□ 0.14
HULC.1-201ENST00000612720 SPDYE6P0CI01 402 aa15.94■□□□□ 0.14
HULC.1-201ENST00000612720 SPDYE2Q495Y8 402 aa15.94■□□□□ 0.14
HULC.1-201ENST00000612720 SSUH2Q9Y2M2 353 aa15.81■□□□□ 0.12
HULC.1-201ENST00000612720 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
HULC.1-201ENST00000612720 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
HULC.1-201ENST00000612720 PIP4P2Q8N4L2 257 aa15.68■□□□□ 0.1
HULC.1-201ENST00000612720 FXR2P51116 673 aaKnown RBP eCLIP15.65■□□□□ 0.1
HULC.1-201ENST00000612720 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
HULC.1-201ENST00000612720 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
HULC.1-201ENST00000612720 CLEC11AQ9Y240 323 aa15.49■□□□□ 0.07
HULC.1-201ENST00000612720 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
HULC.1-201ENST00000612720 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
HULC.1-201ENST00000612720 PRR29P0C7W0 189 aa15.29■□□□□ 0.04
HULC.1-201ENST00000612720 HAX1O00165 279 aa15.25■□□□□ 0.03
HULC.1-201ENST00000612720 CHADLQ6NUI6 762 aa15.25■□□□□ 0.03
HULC.1-201ENST00000612720 SP7Q8TDD2 431 aaPredicted RBP15.24■□□□□ 0.03
HULC.1-201ENST00000612720 EVX2Q03828 476 aa15.22■□□□□ 0.03
HULC.1-201ENST00000612720 PROM2Q8N271 834 aa15.16■□□□□ 0.02
HULC.1-201ENST00000612720 C19orf67A6NJJ6 358 aa15.13■□□□□ 0.01
HULC.1-201ENST00000612720 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
HULC.1-201ENST00000612720 CREBZFQ9NS37 354 aa15.06■□□□□ 0
HULC.1-201ENST00000612720 FARP1Q9Y4F1 1045 aaPredicted RBP15.05■□□□□ -0
HULC.1-201ENST00000612720 CD44P16070 742 aaKnown RBP14.88□□□□□ -0.03
HULC.1-201ENST00000612720 MNX1P50219 401 aaPredicted RBP14.88□□□□□ -0.03
HULC.1-201ENST00000612720 GABBR2O75899 941 aa14.83□□□□□ -0.04
HULC.1-201ENST00000612720 FKBP8Q14318 412 aa14.83□□□□□ -0.04
HULC.1-201ENST00000612720 ZNF579Q8NAF0 562 aaKnown RBP14.71□□□□□ -0.05
HULC.1-201ENST00000612720 NPM1P06748 294 aaKnown RBP eCLIP14.69□□□□□ -0.06
HULC.1-201ENST00000612720 ZRANB1Q9UGI0 708 aa14.69□□□□□ -0.06
HULC.1-201ENST00000612720 CLCN6P51797 869 aa14.62□□□□□ -0.07
HULC.1-201ENST00000612720 MIER1Q8N108 512 aa14.6□□□□□ -0.07
HULC.1-201ENST00000612720 POTEIP0CG38 1075 aa14.58□□□□□ -0.08
HULC.1-201ENST00000612720 PAK3O75914 559 aaPredicted RBP14.55□□□□□ -0.08
HULC.1-201ENST00000612720 PHF12Q96QT6 1004 aa14.55□□□□□ -0.08
HULC.1-201ENST00000612720 GALR2O43603 387 aaPredicted RBP14.5□□□□□ -0.09
HULC.1-201ENST00000612720 PLCD3Q8N3E9 789 aa14.49□□□□□ -0.09
HULC.1-201ENST00000612720 PLEKHG5O94827 1062 aa14.48□□□□□ -0.09
HULC.1-201ENST00000612720 RASEFQ8IZ41 740 aa14.45□□□□□ -0.1
HULC.1-201ENST00000612720 TSPYL2Q9H2G4 693 aaPredicted RBP14.45□□□□□ -0.1
HULC.1-201ENST00000612720 CCDC61Q9Y6R9 512 aa14.45□□□□□ -0.1
HULC.1-201ENST00000612720 FBXO3Q9UK99 471 aa14.42□□□□□ -0.1
HULC.1-201ENST00000612720 NUBP1P53384 320 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms