RNA–Protein interactions for RNA: ENST00000453965.2

LINC01878-202, Transcript of long intergenic non-protein coding RNA 1878, humanhuman

TSL 3 BASIC

Gene LINC01878, Length 405 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01878-202ENST00000453965 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
LINC01878-202ENST00000453965 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
LINC01878-202ENST00000453965 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
LINC01878-202ENST00000453965 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
LINC01878-202ENST00000453965 PLPPR3Q6T4P5 718 aa18.83■□□□□ 0.6
LINC01878-202ENST00000453965 FOXD1Q16676 465 aa18.77■□□□□ 0.6
LINC01878-202ENST00000453965 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
LINC01878-202ENST00000453965 ADRA2BP18089 450 aa18.11■□□□□ 0.49
LINC01878-202ENST00000453965 POTEDQ86YR6 584 aa18.03■□□□□ 0.48
LINC01878-202ENST00000453965 PIAS4Q8N2W9 510 aaPredicted RBP17.67■□□□□ 0.42
LINC01878-202ENST00000453965 MSH5O43196 834 aa17.15■□□□□ 0.34
LINC01878-202ENST00000453965 PPP4R3CPQ6ZMV5 832 aa16.66■□□□□ 0.26
LINC01878-202ENST00000453965 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
LINC01878-202ENST00000453965 KCNA4P22459 653 aa16.39■□□□□ 0.21
LINC01878-202ENST00000453965 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
LINC01878-202ENST00000453965 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
LINC01878-202ENST00000453965 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
LINC01878-202ENST00000453965 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
LINC01878-202ENST00000453965 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
LINC01878-202ENST00000453965 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
LINC01878-202ENST00000453965 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
LINC01878-202ENST00000453965 SLC4A1APQ9BWU0 796 aaKnown RBP15.54■□□□□ 0.08
LINC01878-202ENST00000453965 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
LINC01878-202ENST00000453965 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
LINC01878-202ENST00000453965 EHMT2Q96KQ7 1210 aa15.23■□□□□ 0.03
LINC01878-202ENST00000453965 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
LINC01878-202ENST00000453965 ZBTB22O15209 634 aa15.16■□□□□ 0.02
LINC01878-202ENST00000453965 CACNB1Q02641 598 aaPredicted RBP15.07■□□□□ 0
LINC01878-202ENST00000453965 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
LINC01878-202ENST00000453965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
LINC01878-202ENST00000453965 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
LINC01878-202ENST00000453965 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
LINC01878-202ENST00000453965 RNF39Q9H2S5 420 aa14.78□□□□□ -0.04
LINC01878-202ENST00000453965 MYCNP04198 464 aaPredicted RBP14.73□□□□□ -0.05
LINC01878-202ENST00000453965 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
LINC01878-202ENST00000453965 ATF5Q9Y2D1 282 aaPredicted RBP14.5□□□□□ -0.09
LINC01878-202ENST00000453965 SAMD1Q6SPF0 538 aaPredicted RBP14.48□□□□□ -0.09
LINC01878-202ENST00000453965 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
LINC01878-202ENST00000453965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.46□□□□□ -0.09
LINC01878-202ENST00000453965 HNRNPUL2Q1KMD3 747 aaKnown RBP14.46□□□□□ -0.09
LINC01878-202ENST00000453965 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
LINC01878-202ENST00000453965 CAPN15O75808 1086 aa14.31□□□□□ -0.12
LINC01878-202ENST00000453965 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
LINC01878-202ENST00000453965 APLP2Q06481 763 aa14.27□□□□□ -0.13
LINC01878-202ENST00000453965 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
LINC01878-202ENST00000453965 ABCB7O75027 752 aa14.13□□□□□ -0.15
LINC01878-202ENST00000453965 DSG3P32926 999 aa14.09□□□□□ -0.15
LINC01878-202ENST00000453965 POLA2Q14181 598 aa14.04□□□□□ -0.16
LINC01878-202ENST00000453965 POTEHQ6S545 545 aa13.93□□□□□ -0.18
LINC01878-202ENST00000453965 MKRN4PQ13434 485 aaPredicted RBP13.85□□□□□ -0.19
LINC01878-202ENST00000453965 FBLN2P98095 1184 aa13.68□□□□□ -0.22
LINC01878-202ENST00000453965 ZBTB12Q9Y330 459 aaPredicted RBP13.68□□□□□ -0.22
LINC01878-202ENST00000453965 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
LINC01878-202ENST00000453965 FKBP8Q14318 412 aa13.54□□□□□ -0.24
LINC01878-202ENST00000453965 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
LINC01878-202ENST00000453965 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
LINC01878-202ENST00000453965 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
LINC01878-202ENST00000453965 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
LINC01878-202ENST00000453965 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
LINC01878-202ENST00000453965 SSUH2Q9Y2M2 353 aa13.34□□□□□ -0.27
LINC01878-202ENST00000453965 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
LINC01878-202ENST00000453965 PROM2Q8N271 834 aa13.26□□□□□ -0.29
LINC01878-202ENST00000453965 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC01878-202ENST00000453965 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
LINC01878-202ENST00000453965 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
LINC01878-202ENST00000453965 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
LINC01878-202ENST00000453965 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
LINC01878-202ENST00000453965 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
LINC01878-202ENST00000453965 FBXO3Q9UK99 471 aa12.89□□□□□ -0.35
LINC01878-202ENST00000453965 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
LINC01878-202ENST00000453965 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
LINC01878-202ENST00000453965 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
LINC01878-202ENST00000453965 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
LINC01878-202ENST00000453965 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
LINC01878-202ENST00000453965 CHADLQ6NUI6 762 aa12.73□□□□□ -0.37
LINC01878-202ENST00000453965 IFNLR1Q8IU57 520 aaPredicted RBP12.72□□□□□ -0.37
LINC01878-202ENST00000453965 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC01878-202ENST00000453965 MIER1Q8N108 512 aa12.71□□□□□ -0.37
LINC01878-202ENST00000453965 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
LINC01878-202ENST00000453965 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
LINC01878-202ENST00000453965 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
LINC01878-202ENST00000453965 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
LINC01878-202ENST00000453965 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
LINC01878-202ENST00000453965 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
LINC01878-202ENST00000453965 PLEKHG5O94827 1062 aa12.53□□□□□ -0.4
LINC01878-202ENST00000453965 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
LINC01878-202ENST00000453965 SPOCK2Q92563 424 aa12.47□□□□□ -0.41
LINC01878-202ENST00000453965 NUBP1P53384 320 aa12.45□□□□□ -0.42
LINC01878-202ENST00000453965 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
LINC01878-202ENST00000453965 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
LINC01878-202ENST00000453965 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
LINC01878-202ENST00000453965 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC01878-202ENST00000453965 PKD2Q13563 968 aa12.32□□□□□ -0.44
LINC01878-202ENST00000453965 TSPYL2Q9H2G4 693 aaPredicted RBP12.32□□□□□ -0.44
LINC01878-202ENST00000453965 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
LINC01878-202ENST00000453965 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
LINC01878-202ENST00000453965 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
LINC01878-202ENST00000453965 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
LINC01878-202ENST00000453965 EVX2Q03828 476 aa12.28□□□□□ -0.44
LINC01878-202ENST00000453965 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms