RNA–Protein interactions for RNA: ENST00000609752.1

LINC00484-208, long intergenic non-protein coding RNA 484, humanhuman

TSL 4 BASIC

Gene LINC00484, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00484-208ENST00000609752 AEBP2Q6ZN18 517 aaPredicted RBP24.36■■□□□ 1.49
LINC00484-208ENST00000609752 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
LINC00484-208ENST00000609752 PHF23Q9BUL5 403 aaPredicted RBP20.86■□□□□ 0.93
LINC00484-208ENST00000609752 SENP3Q9H4L4 574 aaPredicted RBP20.77■□□□□ 0.92
LINC00484-208ENST00000609752 FOXD1Q16676 465 aa19.36■□□□□ 0.69
LINC00484-208ENST00000609752 PLPPR3Q6T4P5 718 aa19.31■□□□□ 0.68
LINC00484-208ENST00000609752 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
LINC00484-208ENST00000609752 ADRA2BP18089 450 aa18.39■□□□□ 0.53
LINC00484-208ENST00000609752 PIAS4Q8N2W9 510 aaPredicted RBP18.12■□□□□ 0.49
LINC00484-208ENST00000609752 MSH5O43196 834 aa18.1■□□□□ 0.49
LINC00484-208ENST00000609752 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
LINC00484-208ENST00000609752 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
LINC00484-208ENST00000609752 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
LINC00484-208ENST00000609752 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
LINC00484-208ENST00000609752 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
LINC00484-208ENST00000609752 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
LINC00484-208ENST00000609752 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
LINC00484-208ENST00000609752 KCNA4P22459 653 aa16.48■□□□□ 0.23
LINC00484-208ENST00000609752 NPM3O75607 178 aaKnown RBP16.26■□□□□ 0.19
LINC00484-208ENST00000609752 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
LINC00484-208ENST00000609752 HOXD11P31277 338 aaPredicted RBP16.18■□□□□ 0.18
LINC00484-208ENST00000609752 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
LINC00484-208ENST00000609752 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
LINC00484-208ENST00000609752 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
LINC00484-208ENST00000609752 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
LINC00484-208ENST00000609752 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
LINC00484-208ENST00000609752 RNF39Q9H2S5 420 aa15.45■□□□□ 0.06
LINC00484-208ENST00000609752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.06
LINC00484-208ENST00000609752 SLC4A2P04920 1241 aa15.35■□□□□ 0.05
LINC00484-208ENST00000609752 ABCC9O60706 1549 aa15.24■□□□□ 0.03
LINC00484-208ENST00000609752 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
LINC00484-208ENST00000609752 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
LINC00484-208ENST00000609752 ZBTB22O15209 634 aa15.15■□□□□ 0.02
LINC00484-208ENST00000609752 EHMT2Q96KQ7 1210 aa15.13■□□□□ 0.01
LINC00484-208ENST00000609752 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
LINC00484-208ENST00000609752 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
LINC00484-208ENST00000609752 CSRNP3Q8WYN3 585 aa15.02■□□□□ -0
LINC00484-208ENST00000609752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
LINC00484-208ENST00000609752 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
LINC00484-208ENST00000609752 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
LINC00484-208ENST00000609752 APLP2Q06481 763 aa14.88□□□□□ -0.03
LINC00484-208ENST00000609752 ATXN8OSP0DMR3 200 aa14.75□□□□□ -0.05
LINC00484-208ENST00000609752 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
LINC00484-208ENST00000609752 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
LINC00484-208ENST00000609752 CAPN15O75808 1086 aa14.67□□□□□ -0.06
LINC00484-208ENST00000609752 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
LINC00484-208ENST00000609752 ATF5Q9Y2D1 282 aaPredicted RBP14.59□□□□□ -0.07
LINC00484-208ENST00000609752 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
LINC00484-208ENST00000609752 DSG3P32926 999 aa14.48□□□□□ -0.09
LINC00484-208ENST00000609752 ABCB7O75027 752 aa14.35□□□□□ -0.11
LINC00484-208ENST00000609752 POLA2Q14181 598 aa14.34□□□□□ -0.11
LINC00484-208ENST00000609752 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
LINC00484-208ENST00000609752 DNAJC5Q9H3Z4 198 aa14.27□□□□□ -0.13
LINC00484-208ENST00000609752 ZBTB12Q9Y330 459 aaPredicted RBP14.19□□□□□ -0.14
LINC00484-208ENST00000609752 UNC13AQ9UPW8 1703 aa14.08□□□□□ -0.16
LINC00484-208ENST00000609752 FBLN2P98095 1184 aa14.06□□□□□ -0.16
LINC00484-208ENST00000609752 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
LINC00484-208ENST00000609752 NACADO15069 1562 aa13.96□□□□□ -0.17
LINC00484-208ENST00000609752 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC00484-208ENST00000609752 POTEHQ6S545 545 aa13.88□□□□□ -0.19
LINC00484-208ENST00000609752 BICRAQ9NZM4 1560 aa13.87□□□□□ -0.19
LINC00484-208ENST00000609752 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
LINC00484-208ENST00000609752 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
LINC00484-208ENST00000609752 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
LINC00484-208ENST00000609752 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
LINC00484-208ENST00000609752 SPDYE2BA6NHP3 402 aa13.76□□□□□ -0.21
LINC00484-208ENST00000609752 SPDYE6P0CI01 402 aa13.76□□□□□ -0.21
LINC00484-208ENST00000609752 SPDYE2Q495Y8 402 aa13.76□□□□□ -0.21
LINC00484-208ENST00000609752 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
LINC00484-208ENST00000609752 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
LINC00484-208ENST00000609752 SHROOM4Q9ULL8 1493 aa13.66□□□□□ -0.22
LINC00484-208ENST00000609752 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
LINC00484-208ENST00000609752 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
LINC00484-208ENST00000609752 EIF4G1Q04637 1599 aaKnown RBP13.59□□□□□ -0.23
LINC00484-208ENST00000609752 FKBP8Q14318 412 aa13.58□□□□□ -0.24
LINC00484-208ENST00000609752 CUX2O14529 1486 aa13.55□□□□□ -0.24
LINC00484-208ENST00000609752 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
LINC00484-208ENST00000609752 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
LINC00484-208ENST00000609752 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
LINC00484-208ENST00000609752 PROM2Q8N271 834 aa13.46□□□□□ -0.25
LINC00484-208ENST00000609752 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
LINC00484-208ENST00000609752 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
LINC00484-208ENST00000609752 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
LINC00484-208ENST00000609752 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
LINC00484-208ENST00000609752 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
LINC00484-208ENST00000609752 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
LINC00484-208ENST00000609752 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
LINC00484-208ENST00000609752 SCRIBQ14160 1630 aa13.23□□□□□ -0.29
LINC00484-208ENST00000609752 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
LINC00484-208ENST00000609752 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
LINC00484-208ENST00000609752 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
LINC00484-208ENST00000609752 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00484-208ENST00000609752 THOC2Q8NI27 1593 aaKnown RBP13.05□□□□□ -0.32
LINC00484-208ENST00000609752 DCAF1Q9Y4B6 1507 aa13.04□□□□□ -0.32
LINC00484-208ENST00000609752 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
LINC00484-208ENST00000609752 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
LINC00484-208ENST00000609752 PLEKHG5O94827 1062 aa12.96□□□□□ -0.33
LINC00484-208ENST00000609752 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
LINC00484-208ENST00000609752 HAX1O00165 279 aa12.95□□□□□ -0.34
LINC00484-208ENST00000609752 MIER1Q8N108 512 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms