RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 AEBP2Q6ZN18 517 aaPredicted RBP28.98■■■□□ 2.23
UPP2-IT1-201ENST00000439185 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
UPP2-IT1-201ENST00000439185 SENP3Q9H4L4 574 aaPredicted RBP24.68■■□□□ 1.54
UPP2-IT1-201ENST00000439185 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
UPP2-IT1-201ENST00000439185 FOXD1Q16676 465 aa23■■□□□ 1.27
UPP2-IT1-201ENST00000439185 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
UPP2-IT1-201ENST00000439185 PPP6R1Q9UPN7 881 aa21.65■■□□□ 1.06
UPP2-IT1-201ENST00000439185 ADRA2BP18089 450 aa21.6■■□□□ 1.05
UPP2-IT1-201ENST00000439185 PIAS4Q8N2W9 510 aaPredicted RBP21.54■■□□□ 1.04
UPP2-IT1-201ENST00000439185 MSH5O43196 834 aa21.44■■□□□ 1.02
UPP2-IT1-201ENST00000439185 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
UPP2-IT1-201ENST00000439185 MAPK8IP2Q13387 824 aaPredicted RBP19.8■□□□□ 0.76
UPP2-IT1-201ENST00000439185 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
UPP2-IT1-201ENST00000439185 DMRT2Q9Y5R5 561 aa19.6■□□□□ 0.73
UPP2-IT1-201ENST00000439185 PPP4R3CPQ6ZMV5 832 aa19.48■□□□□ 0.71
UPP2-IT1-201ENST00000439185 CNKSR2Q8WXI2 1034 aa19.06■□□□□ 0.64
UPP2-IT1-201ENST00000439185 HOXD11P31277 338 aaPredicted RBP18.93■□□□□ 0.62
UPP2-IT1-201ENST00000439185 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
UPP2-IT1-201ENST00000439185 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
UPP2-IT1-201ENST00000439185 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
UPP2-IT1-201ENST00000439185 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
UPP2-IT1-201ENST00000439185 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
UPP2-IT1-201ENST00000439185 KCNA4P22459 653 aa18.31■□□□□ 0.52
UPP2-IT1-201ENST00000439185 RNF39Q9H2S5 420 aa18.31■□□□□ 0.52
UPP2-IT1-201ENST00000439185 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
UPP2-IT1-201ENST00000439185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.48
UPP2-IT1-201ENST00000439185 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
UPP2-IT1-201ENST00000439185 U3KPZ7 1027 aaPredicted RBP17.69■□□□□ 0.42
UPP2-IT1-201ENST00000439185 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
UPP2-IT1-201ENST00000439185 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
UPP2-IT1-201ENST00000439185 CAPN15O75808 1086 aa17.38■□□□□ 0.37
UPP2-IT1-201ENST00000439185 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
UPP2-IT1-201ENST00000439185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
UPP2-IT1-201ENST00000439185 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
UPP2-IT1-201ENST00000439185 DSG3P32926 999 aa17.22■□□□□ 0.35
UPP2-IT1-201ENST00000439185 APLP2Q06481 763 aa17.2■□□□□ 0.34
UPP2-IT1-201ENST00000439185 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
UPP2-IT1-201ENST00000439185 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
UPP2-IT1-201ENST00000439185 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
UPP2-IT1-201ENST00000439185 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
UPP2-IT1-201ENST00000439185 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
UPP2-IT1-201ENST00000439185 ABCB7O75027 752 aa16.99■□□□□ 0.31
UPP2-IT1-201ENST00000439185 ZBTB22O15209 634 aa16.82■□□□□ 0.28
UPP2-IT1-201ENST00000439185 POLA2Q14181 598 aa16.72■□□□□ 0.27
UPP2-IT1-201ENST00000439185 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
UPP2-IT1-201ENST00000439185 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
UPP2-IT1-201ENST00000439185 RBM42Q9BTD8 480 aaKnown RBP16.41■□□□□ 0.22
UPP2-IT1-201ENST00000439185 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
UPP2-IT1-201ENST00000439185 POTEHQ6S545 545 aa16.23■□□□□ 0.19
UPP2-IT1-201ENST00000439185 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.19
UPP2-IT1-201ENST00000439185 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
UPP2-IT1-201ENST00000439185 EHMT2Q96KQ7 1210 aa16.1■□□□□ 0.17
UPP2-IT1-201ENST00000439185 AKT1S1Q96B36 256 aa16.08■□□□□ 0.16
UPP2-IT1-201ENST00000439185 FBLN2P98095 1184 aa16.05■□□□□ 0.16
UPP2-IT1-201ENST00000439185 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
UPP2-IT1-201ENST00000439185 MKRN4PQ13434 485 aaPredicted RBP15.95■□□□□ 0.14
UPP2-IT1-201ENST00000439185 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
UPP2-IT1-201ENST00000439185 SPDYE2BA6NHP3 402 aa15.87■□□□□ 0.13
UPP2-IT1-201ENST00000439185 SPDYE6P0CI01 402 aa15.87■□□□□ 0.13
UPP2-IT1-201ENST00000439185 SPDYE2Q495Y8 402 aa15.87■□□□□ 0.13
UPP2-IT1-201ENST00000439185 PITPNM1O00562 1244 aa15.76■□□□□ 0.11
UPP2-IT1-201ENST00000439185 ZNF692Q9BU19 519 aaPredicted RBP15.74■□□□□ 0.11
UPP2-IT1-201ENST00000439185 SSUH2Q9Y2M2 353 aa15.67■□□□□ 0.1
UPP2-IT1-201ENST00000439185 PIP4P2Q8N4L2 257 aa15.66■□□□□ 0.1
UPP2-IT1-201ENST00000439185 FXR2P51116 673 aaKnown RBP eCLIP15.58■□□□□ 0.08
UPP2-IT1-201ENST00000439185 SPDYE1Q8NFV5 336 aaPredicted RBP15.57■□□□□ 0.08
UPP2-IT1-201ENST00000439185 CLEC11AQ9Y240 323 aa15.56■□□□□ 0.08
UPP2-IT1-201ENST00000439185 PABPN1Q86U42 306 aaKnown RBP eCLIP15.51■□□□□ 0.07
UPP2-IT1-201ENST00000439185 PRKAR2AP13861 404 aaKnown RBP15.37■□□□□ 0.05
UPP2-IT1-201ENST00000439185 HAX1O00165 279 aa15.36■□□□□ 0.05
UPP2-IT1-201ENST00000439185 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
UPP2-IT1-201ENST00000439185 SPDYE4A6NLX3 237 aa15.29■□□□□ 0.04
UPP2-IT1-201ENST00000439185 SP7Q8TDD2 431 aaPredicted RBP15.28■□□□□ 0.04
UPP2-IT1-201ENST00000439185 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
UPP2-IT1-201ENST00000439185 EVX2Q03828 476 aa15.18■□□□□ 0.02
UPP2-IT1-201ENST00000439185 STAG3Q9UJ98 1225 aa15.1■□□□□ 0.01
UPP2-IT1-201ENST00000439185 C19orf67A6NJJ6 358 aa15.08■□□□□ 0
UPP2-IT1-201ENST00000439185 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
UPP2-IT1-201ENST00000439185 CREBZFQ9NS37 354 aa14.96□□□□□ -0.01
UPP2-IT1-201ENST00000439185 PROM2Q8N271 834 aa14.9□□□□□ -0.02
UPP2-IT1-201ENST00000439185 CD44P16070 742 aaKnown RBP14.88□□□□□ -0.03
UPP2-IT1-201ENST00000439185 GABBR2O75899 941 aa14.83□□□□□ -0.04
UPP2-IT1-201ENST00000439185 ZRANB1Q9UGI0 708 aa14.72□□□□□ -0.05
UPP2-IT1-201ENST00000439185 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
UPP2-IT1-201ENST00000439185 FKBP8Q14318 412 aa14.7□□□□□ -0.06
UPP2-IT1-201ENST00000439185 NPM1P06748 294 aaKnown RBP eCLIP14.69□□□□□ -0.06
UPP2-IT1-201ENST00000439185 ZNF579Q8NAF0 562 aaKnown RBP14.65□□□□□ -0.06
UPP2-IT1-201ENST00000439185 CLCN6P51797 869 aa14.62□□□□□ -0.07
UPP2-IT1-201ENST00000439185 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
UPP2-IT1-201ENST00000439185 MIER1Q8N108 512 aa14.59□□□□□ -0.07
UPP2-IT1-201ENST00000439185 PLEKHG5O94827 1062 aa14.54□□□□□ -0.08
UPP2-IT1-201ENST00000439185 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
UPP2-IT1-201ENST00000439185 PHF12Q96QT6 1004 aa14.52□□□□□ -0.09
UPP2-IT1-201ENST00000439185 GALR2O43603 387 aaPredicted RBP14.48□□□□□ -0.09
UPP2-IT1-201ENST00000439185 PLCD3Q8N3E9 789 aa14.48□□□□□ -0.09
UPP2-IT1-201ENST00000439185 DCBLD2Q96PD2 775 aa14.48□□□□□ -0.09
UPP2-IT1-201ENST00000439185 TSPYL2Q9H2G4 693 aaPredicted RBP14.46□□□□□ -0.09
UPP2-IT1-201ENST00000439185 LHX8Q68G74 356 aa14.36□□□□□ -0.11
UPP2-IT1-201ENST00000439185 RASEFQ8IZ41 740 aa14.35□□□□□ -0.11
UPP2-IT1-201ENST00000439185 CCDC61Q9Y6R9 512 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms