Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 AC105020.6-201ENST00000621523 1217 ntBASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAMD4AQ9UPU9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SAMD4AQ9UPU9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.33■□□□□ 0.53
SAMD4AQ9UPU9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SAMD4AQ9UPU9 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.33■□□□□ 0.52
SAMD4AQ9UPU9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAMD4AQ9UPU9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.33■□□□□ 0.52
SAMD4AQ9UPU9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SAMD4AQ9UPU9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAMD4AQ9UPU9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.33■□□□□ 0.52
SAMD4AQ9UPU9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.33■□□□□ 0.52
SAMD4AQ9UPU9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAMD4AQ9UPU9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.32■□□□□ 0.52
SAMD4AQ9UPU9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 RARRES2P4-201ENST00000514074 484 ntBASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 KRT18P61-201ENST00000585825 1298 ntBASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SAMD4AQ9UPU9 HCG11-201ENST00000411553 5696 ntBASIC18.3■□□□□ 0.52
SAMD4AQ9UPU9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SAMD4AQ9UPU9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SAMD4AQ9UPU9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.3■□□□□ 0.52
SAMD4AQ9UPU9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SAMD4AQ9UPU9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SAMD4AQ9UPU9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SAMD4AQ9UPU9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms