Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.47■□□□□ 0.39
COPS3Q9UNS2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 AC093503.3-201ENST00000624917 2352 ntBASIC17.46■□□□□ 0.39
COPS3Q9UNS2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.46■□□□□ 0.39
COPS3Q9UNS2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COPS3Q9UNS2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
COPS3Q9UNS2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
COPS3Q9UNS2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 HLA-G-202ENST00000376815 851 ntBASIC17.45■□□□□ 0.38
COPS3Q9UNS2 HLA-G-203ENST00000376818 1127 ntBASIC17.45■□□□□ 0.38
COPS3Q9UNS2 AC016769.1-201ENST00000409132 1010 ntBASIC17.45■□□□□ 0.38
COPS3Q9UNS2 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.45■□□□□ 0.38
COPS3Q9UNS2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COPS3Q9UNS2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms