Protein–RNA interactions for Protein: Q9UMS4

PRPF19, Pre-mRNA-processing factor 19, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19Q9UMS4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.72■□□□□ 0.59
PRPF19Q9UMS4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRPF19Q9UMS4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRPF19Q9UMS4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PRPF19Q9UMS4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRPF19Q9UMS4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PRPF19Q9UMS4 AC141586.3-201ENST00000562166 1838 ntBASIC18.72■□□□□ 0.59
PRPF19Q9UMS4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.72■□□□□ 0.59
PRPF19Q9UMS4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.72■□□□□ 0.59
PRPF19Q9UMS4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 AC020916.1-201ENST00000587762 1774 ntBASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 AP001160.3-201ENST00000601484 763 ntBASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 AC093525.10-201ENST00000625130 1569 ntBASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.71■□□□□ 0.59
PRPF19Q9UMS4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PRPF19Q9UMS4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 AC008406.3-201ENST00000620001 1374 ntBASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 WIZP1-201ENST00000531444 2299 ntBASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 IRS3P-201ENST00000223076 1006 ntBASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 KRT8P20-201ENST00000423953 1409 ntBASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 AC020763.4-201ENST00000623414 4170 ntBASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.7■□□□□ 0.58
PRPF19Q9UMS4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 SLC7A5P1-201ENST00000568957 537 ntBASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 BICD1-207ENST00000551848 1962 ntBASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.69■□□□□ 0.58
PRPF19Q9UMS4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms