Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.19■□□□□ 0.5
TMCC3Q9ULS5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMCC3Q9ULS5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMCC3Q9ULS5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.19■□□□□ 0.5
TMCC3Q9ULS5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 HLA-G-202ENST00000376815 851 ntBASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 HLA-G-203ENST00000376818 1127 ntBASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMCC3Q9ULS5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 AL032819.2-201ENST00000624543 2162 ntBASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.17■□□□□ 0.5
TMCC3Q9ULS5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 MCRIP2P1-201ENST00000394346 511 ntBASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 AC013268.1-206ENST00000638368 961 ntBASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 AC112229.1-201ENST00000639295 961 ntBASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMCC3Q9ULS5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 AC007322.4-201ENST00000509611 723 ntBASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 AC016405.3-201ENST00000607710 860 ntBASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 HTR7P1-202ENST00000624664 4411 ntBASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMCC3Q9ULS5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms