Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 FAM197Y1-201ENST00000421178 764 ntBASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.58■□□□□ 0.89
CSNK1G1Q9HCP0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1G1Q9HCP0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1G1Q9HCP0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CSNK1G1Q9HCP0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CSNK1G1Q9HCP0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.58■□□□□ 0.88
CSNK1G1Q9HCP0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.58■□□□□ 0.88
CSNK1G1Q9HCP0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1G1Q9HCP0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CSNK1G1Q9HCP0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSNK1G1Q9HCP0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 HLA-A-209ENST00000638375 975 ntBASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G1Q9HCP0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 KRT16P1-201ENST00000399124 1418 ntBASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 MIR4785-201ENST00000585005 73 ntBASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G1Q9HCP0 KRT17P2-201ENST00000300992 1314 ntBASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 AC026471.5-201ENST00000615068 467 ntBASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 CR392000.1-201ENST00000624770 1228 ntBASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G1Q9HCP0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1G1Q9HCP0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms