Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 AL138781.2-201ENST00000617896 1843 ntBASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 MIR939-201ENST00000401314 82 ntBASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 AC010141.2-201ENST00000452426 721 ntBASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 AC091305.1-201ENST00000479476 895 ntBASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 AF213884.3-201ENST00000563833 479 ntBASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 AC106739.1-201ENST00000617035 715 ntBASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 AL355001.2-201ENST00000620617 1191 ntBASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.13□□□□□ -0.31
SND1-IT1Q9HBX3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
SND1-IT1Q9HBX3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 AL032819.2-201ENST00000624543 2162 ntBASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.11□□□□□ -0.31
SND1-IT1Q9HBX3 AL358852.1-201ENST00000623174 1268 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms