Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCP1Q9H5V8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCP1Q9H5V8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDCP1Q9H5V8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.29■□□□□ 0.52
CDCP1Q9H5V8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.29■□□□□ 0.52
CDCP1Q9H5V8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDCP1Q9H5V8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCP1Q9H5V8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCP1Q9H5V8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCP1Q9H5V8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 TSPY7P-201ENST00000431358 1114 ntBASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDCP1Q9H5V8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 AC073314.1-201ENST00000568729 2216 ntBASIC18.27■□□□□ 0.52
CDCP1Q9H5V8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CDCP1Q9H5V8 AC087289.5-201ENST00000586076 3175 ntBASIC18.27■□□□□ 0.51
CDCP1Q9H5V8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CDCP1Q9H5V8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCP1Q9H5V8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCP1Q9H5V8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCP1Q9H5V8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.27■□□□□ 0.51
CDCP1Q9H5V8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 AC018553.1-201ENST00000616682 1458 ntBASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 AC116351.2-201ENST00000606540 1585 ntBASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 AC113410.3-201ENST00000623366 203 ntBASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCP1Q9H5V8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDCP1Q9H5V8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP1Q9H5V8 AP006587.1-201ENST00000534129 1502 ntBASIC18.25■□□□□ 0.51
CDCP1Q9H5V8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP1Q9H5V8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCP1Q9H5V8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.25■□□□□ 0.51
CDCP1Q9H5V8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCP1Q9H5V8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCP1Q9H5V8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCP1Q9H5V8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCP1Q9H5V8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms