Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXP3Q9BZS1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 KRT18P29-201ENST00000397031 1267 ntBASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 AC100791.3-201ENST00000617619 330 ntBASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXP3Q9BZS1 LINC01465-201ENST00000408887 1940 ntBASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 AC083880.1-201ENST00000608266 535 ntBASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXP3Q9BZS1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 AC093827.2-201ENST00000512654 315 ntBASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 RARRES2P4-201ENST00000514074 484 ntBASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 ITM2C-210ENST00000620962 501 ntBASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXP3Q9BZS1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXP3Q9BZS1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms